(5 nodes) Nonhomologous end joining complex network (Vulpes vulpes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	XRCC6	LOW QUALITY PROTEIN: X-ray repair cross-complementing protein 6. (593 aa)
	DCLRE1C	Protein artemis isoform X2. (654 aa)
	XRCC5	X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family. (799 aa)
	PRKDC	DNA-dependent protein kinase catalytic subunit isoform X2; Belongs to the PI3/PI4-kinase family. (4136 aa)
	ENSVVUP00000024782	annotation not available (252 aa)

Your Current Organism:

Vulpes vulpes

NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DCLRE1C	ENSVVUP00000024782	ENSVVUP00000006905	ENSVVUP00000024782	Protein artemis isoform X2.	annotation not available	0.863
DCLRE1C	PRKDC	ENSVVUP00000006905	ENSVVUP00000022479	Protein artemis isoform X2.	DNA-dependent protein kinase catalytic subunit isoform X2; Belongs to the PI3/PI4-kinase family.	0.958
DCLRE1C	XRCC5	ENSVVUP00000006905	ENSVVUP00000012044	Protein artemis isoform X2.	X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family.	0.980
DCLRE1C	XRCC6	ENSVVUP00000006905	ENSVVUP00000004450	Protein artemis isoform X2.	LOW QUALITY PROTEIN: X-ray repair cross-complementing protein 6.	0.863
ENSVVUP00000024782	DCLRE1C	ENSVVUP00000024782	ENSVVUP00000006905	annotation not available	Protein artemis isoform X2.	0.863
ENSVVUP00000024782	PRKDC	ENSVVUP00000024782	ENSVVUP00000022479	annotation not available	DNA-dependent protein kinase catalytic subunit isoform X2; Belongs to the PI3/PI4-kinase family.	0.907
ENSVVUP00000024782	XRCC5	ENSVVUP00000024782	ENSVVUP00000012044	annotation not available	X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family.	0.982
PRKDC	DCLRE1C	ENSVVUP00000022479	ENSVVUP00000006905	DNA-dependent protein kinase catalytic subunit isoform X2; Belongs to the PI3/PI4-kinase family.	Protein artemis isoform X2.	0.958
PRKDC	ENSVVUP00000024782	ENSVVUP00000022479	ENSVVUP00000024782	DNA-dependent protein kinase catalytic subunit isoform X2; Belongs to the PI3/PI4-kinase family.	annotation not available	0.907
PRKDC	XRCC5	ENSVVUP00000022479	ENSVVUP00000012044	DNA-dependent protein kinase catalytic subunit isoform X2; Belongs to the PI3/PI4-kinase family.	X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family.	0.990
PRKDC	XRCC6	ENSVVUP00000022479	ENSVVUP00000004450	DNA-dependent protein kinase catalytic subunit isoform X2; Belongs to the PI3/PI4-kinase family.	LOW QUALITY PROTEIN: X-ray repair cross-complementing protein 6.	0.907
XRCC5	DCLRE1C	ENSVVUP00000012044	ENSVVUP00000006905	X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family.	Protein artemis isoform X2.	0.980
XRCC5	ENSVVUP00000024782	ENSVVUP00000012044	ENSVVUP00000024782	X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family.	annotation not available	0.982
XRCC5	PRKDC	ENSVVUP00000012044	ENSVVUP00000022479	X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family.	DNA-dependent protein kinase catalytic subunit isoform X2; Belongs to the PI3/PI4-kinase family.	0.990
XRCC5	XRCC6	ENSVVUP00000012044	ENSVVUP00000004450	X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family.	LOW QUALITY PROTEIN: X-ray repair cross-complementing protein 6.	0.990
XRCC6	DCLRE1C	ENSVVUP00000004450	ENSVVUP00000006905	LOW QUALITY PROTEIN: X-ray repair cross-complementing protein 6.	Protein artemis isoform X2.	0.863
XRCC6	PRKDC	ENSVVUP00000004450	ENSVVUP00000022479	LOW QUALITY PROTEIN: X-ray repair cross-complementing protein 6.	DNA-dependent protein kinase catalytic subunit isoform X2; Belongs to the PI3/PI4-kinase family.	0.907
XRCC6	XRCC5	ENSVVUP00000004450	ENSVVUP00000012044	LOW QUALITY PROTEIN: X-ray repair cross-complementing protein 6.	X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family.	0.990