11 items (Vulpes vulpes) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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Your Input:
	PRPF39	pre-mRNA-processing factor 39 isoform X1. (667 aa)
	ENSVVUP00000001557	annotation not available (118 aa)
	SNRPD1	Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. (112 aa)
	U2AF2	Splicing factor U2AF 65 kDa subunit isoform X2. (683 aa)
	ENSVVUP00000013551	annotation not available (165 aa)
	ENSVVUP00000014288	annotation not available (180 aa)
	ENSVVUP00000014399	annotation not available (159 aa)
	ENSVVUP00000025167	annotation not available (118 aa)
	SNRPD3	Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. (201 aa)
	SNRPC	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] (159 aa)
	ENSVVUP00000036461	annotation not available (165 aa)

Your Current Organism:

Vulpes vulpes

NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSVVUP00000001557	PRPF39	ENSVVUP00000001557	ENSVVUP00000000528	annotation not available	pre-mRNA-processing factor 39 isoform X1.	0.601
ENSVVUP00000001557	SNRPD1	ENSVVUP00000001557	ENSVVUP00000005104	annotation not available	Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA.	0.801
ENSVVUP00000001557	SNRPD3	ENSVVUP00000001557	ENSVVUP00000026351	annotation not available	Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing.	0.887
ENSVVUP00000001557	U2AF2	ENSVVUP00000001557	ENSVVUP00000009334	annotation not available	Splicing factor U2AF 65 kDa subunit isoform X2.	0.468
ENSVVUP00000013551	PRPF39	ENSVVUP00000013551	ENSVVUP00000000528	annotation not available	pre-mRNA-processing factor 39 isoform X1.	0.601
ENSVVUP00000013551	SNRPD1	ENSVVUP00000013551	ENSVVUP00000005104	annotation not available	Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA.	0.801
ENSVVUP00000013551	SNRPD3	ENSVVUP00000013551	ENSVVUP00000026351	annotation not available	Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing.	0.887
ENSVVUP00000013551	U2AF2	ENSVVUP00000013551	ENSVVUP00000009334	annotation not available	Splicing factor U2AF 65 kDa subunit isoform X2.	0.468
ENSVVUP00000014288	PRPF39	ENSVVUP00000014288	ENSVVUP00000000528	annotation not available	pre-mRNA-processing factor 39 isoform X1.	0.601
ENSVVUP00000014288	SNRPD1	ENSVVUP00000014288	ENSVVUP00000005104	annotation not available	Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA.	0.801
ENSVVUP00000014288	SNRPD3	ENSVVUP00000014288	ENSVVUP00000026351	annotation not available	Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing.	0.887
ENSVVUP00000014288	U2AF2	ENSVVUP00000014288	ENSVVUP00000009334	annotation not available	Splicing factor U2AF 65 kDa subunit isoform X2.	0.468
ENSVVUP00000014399	PRPF39	ENSVVUP00000014399	ENSVVUP00000000528	annotation not available	pre-mRNA-processing factor 39 isoform X1.	0.601
ENSVVUP00000014399	SNRPD1	ENSVVUP00000014399	ENSVVUP00000005104	annotation not available	Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA.	0.801
ENSVVUP00000014399	SNRPD3	ENSVVUP00000014399	ENSVVUP00000026351	annotation not available	Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing.	0.887
ENSVVUP00000014399	U2AF2	ENSVVUP00000014399	ENSVVUP00000009334	annotation not available	Splicing factor U2AF 65 kDa subunit isoform X2.	0.468
ENSVVUP00000025167	PRPF39	ENSVVUP00000025167	ENSVVUP00000000528	annotation not available	pre-mRNA-processing factor 39 isoform X1.	0.601
ENSVVUP00000025167	SNRPD1	ENSVVUP00000025167	ENSVVUP00000005104	annotation not available	Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA.	0.801
ENSVVUP00000025167	SNRPD3	ENSVVUP00000025167	ENSVVUP00000026351	annotation not available	Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing.	0.887
ENSVVUP00000025167	U2AF2	ENSVVUP00000025167	ENSVVUP00000009334	annotation not available	Splicing factor U2AF 65 kDa subunit isoform X2.	0.468