STRINGSTRING
STRA6 STRA6 CYP26C1 CYP26C1 CYP26A1 CYP26A1 RHO RHO RLBP1 RLBP1 RBP5 RBP5 CYP27C1 CYP27C1 ENSVVUP00000011849 ENSVVUP00000011849 ADH4 ADH4 CYP26B1 CYP26B1 LOC112923739 LOC112923739 CRABP2 CRABP2 CRABP1 CRABP1 ABCA4 ABCA4 RBP7 RBP7 LOC112925484 LOC112925484 LOC112925444 LOC112925444 OPN4 OPN4 RBP3 RBP3 PTGDS PTGDS OPN3 OPN3 ENSVVUP00000037390 ENSVVUP00000037390 PAEP PAEP PAEP-2 PAEP-2 LOC112906929 LOC112906929 RXRA RXRA CYP2W1 CYP2W1 OPN5 OPN5
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
STRA6Receptor for retinol uptake STRA6 isoform X1. (655 aa)
CYP26C1Cytochrome P450 26C1; Belongs to the cytochrome P450 family. (522 aa)
CYP26A1LOW QUALITY PROTEIN: cytochrome P450 26A1; Belongs to the cytochrome P450 family. (495 aa)
RHORhodopsin. (348 aa)
RLBP1Retinaldehyde-binding protein 1. (317 aa)
RBP5Retinol-binding protein 5; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (92 aa)
CYP27C1Cytochrome P450 27C1 isoform X2; Belongs to the cytochrome P450 family. (492 aa)
ENSVVUP00000011849annotation not available (98 aa)
ADH4Alcohol dehydrogenase 4. (379 aa)
CYP26B1Cytochrome P450 26B1; Belongs to the cytochrome P450 family. (561 aa)
LOC112923739LOW QUALITY PROTEIN: fatty acid-binding protein 5. (104 aa)
CRABP2Cellular retinoic acid-binding protein 2; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (339 aa)
CRABP1Cellular retinoic acid-binding protein 1; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (131 aa)
ABCA4Retinal-specific ATP-binding cassette transporter. (2372 aa)
RBP7Retinoid-binding protein 7; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (135 aa)
LOC112925484UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family. (568 aa)
LOC112925444UDP-glucuronosyltransferase 1-3-like. (315 aa)
OPN4Melanopsin. (481 aa)
RBP3Retinol-binding protein 3. (1263 aa)
PTGDSprostaglandin-H2 D-isomerase; Belongs to the calycin superfamily. Lipocalin family. (389 aa)
OPN3Opsin-3; Belongs to the G-protein coupled receptor 1 family. (419 aa)
ENSVVUP00000037390annotation not available (101 aa)
PAEPBeta-lactoglobulin-2-like; Belongs to the calycin superfamily. Lipocalin family. (177 aa)
PAEP-2Glycodelin; Belongs to the calycin superfamily. Lipocalin family. (178 aa)
LOC112906929Beta-lactoglobulin-2-like. (123 aa)
RXRARetinoic acid receptor RXR-alpha isoform X1. (568 aa)
CYP2W1Cytochrome P450 2W1 isoform X2; Belongs to the cytochrome P450 family. (497 aa)
OPN5Opsin-5; Belongs to the G-protein coupled receptor 1 family. (353 aa)
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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