92 items (Vulpes vulpes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MAPRE1-2	Microtubule-associated protein RP/EB family member 1. (126 aa)
	FAM161B	Protein FAM161B. (649 aa)
	CFAP161	Cilia- and flagella-associated protein 161 isoform X1. (328 aa)
	ARL3	ADP-ribosylation factor-like protein 3; Belongs to the small GTPase superfamily. Arf family. (182 aa)
	CUNH9orf135	Protein C9orf135 homolog. (234 aa)
	CUNH19orf71	Uncharacterized protein C19orf71 homolog isoform X1. (213 aa)
	TOGARAM2	TOG array regulator of axonemal microtubules protein 2 isoform X1. (991 aa)
	FBXW11	F-box/WD repeat-containing protein 11 isoform X2. (593 aa)
	PACRG-2	Parkin coregulated gene protein isoform X1. (125 aa)
	PACRG	Parkin coregulated gene protein isoform X2. (123 aa)
	ENSVVUP00000001856	annotation not available (105 aa)
	ARHGAP18	Rho GTPase-activating protein 18. (676 aa)
	MNS1	Meiosis-specific nuclear structural protein 1. (495 aa)
	CUNH1orf194	Uncharacterized protein C1orf194 homolog. (171 aa)
	CUNH15orf65	Uncharacterized protein C15orf65 homolog. (327 aa)
	SAXO1	Stabilizer of axonemal microtubules 1. (505 aa)
	TOGARAM1	TOG array regulator of axonemal microtubules protein 1 isoform X2. (1826 aa)
	EFHB	EF-hand domain-containing family member B. (849 aa)
	TEKT2	Tektin-2. (627 aa)
	EFHC1	EF-hand domain-containing protein 1. (688 aa)
	ENSVVUP00000034938	annotation not available (125 aa)
	NUMA1	Nuclear mitotic apparatus protein 1. (2153 aa)
	ENSVVUP00000035680	annotation not available (126 aa)
	NME7	Nucleoside diphosphate kinase 7; Belongs to the NDK family. (379 aa)
	CLASP1	CLIP-associating protein 1 isoform X4. (1551 aa)
	TEKT1	Tektin-1 isoform X2. (418 aa)
	MAPRE2	Microtubule-associated protein RP/EB family member 2 isoform X1. (493 aa)
	CUNH9orf116	UPF0691 protein C9orf116 homolog isoform X1. (137 aa)
	TPT1	Translationally-controlled tumor protein; Belongs to the TCTP family. (195 aa)
	SPACA9	Sperm acrosome-associated protein 9 isoform X1. (227 aa)
	RIBC2	RIB43A-like with coiled-coils protein 2. (402 aa)
	DYNC1H1	Cytoplasmic dynein 1 heavy chain 1. (697 aa)
	DYNC1H1-2	Cytoplasmic dynein 1 heavy chain 1. (228 aa)
	C1orf189	Uncharacterized protein C1orf189 homolog. (115 aa)
	ENSVVUP00000040212	annotation not available (169 aa)
	REEP1	Receptor expression-enhancing protein. (239 aa)
	CUNH1orf158	Uncharacterized protein C1orf158 homolog. (195 aa)
	NIN	Ninein isoform X2. (2134 aa)
	RIBC1	RIB43A-like with coiled-coils protein 1 isoform X1. (379 aa)
	TEKT3	Tektin-3. (490 aa)
	BCL10	B-cell lymphoma/leukemia 10. (235 aa)
	GRAMD2B	GRAM domain-containing protein 2B isoform X3. (478 aa)
	FHDC1	FH2 domain-containing protein 1. (992 aa)
	GTSE1	G2 and S phase-expressed protein 1. (900 aa)
	MAP9	Microtubule-associated protein 9. (1085 aa)
	FAM166B	Protein FAM166B isoform X1. (280 aa)
	TUBG1-2	Tubulin gamma-1 chain. (251 aa)
	TUBG1	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome. (491 aa)
	CFAP20	Cilia- and flagella-associated protein 20. (280 aa)
	RAB3D	Ras-related protein Rab-3D. (219 aa)
	APC2	Adenomatous polyposis coli protein 2. (1719 aa)
	ODF3L2	Outer dense fiber protein 3-like protein 2. (346 aa)
	CLASP2	CLIP-associating protein 2 isoform X11. (1508 aa)
	PAFAH1B1	Platelet-activating factor acetylhydrolase IB subunit alpha; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. Required during brain development for the proliferation of neuronal precursors and the migration of newly formed neurons from the ven [...] (410 aa)
	CLMP	LOW QUALITY PROTEIN: CXADR-like membrane protein. (362 aa)
	SPAG8	LOW QUALITY PROTEIN: sperm-associated antigen 8. (68 aa)
	CEP162	Centrosomal protein of 162 kDa isoform X3. (1386 aa)
	CYLD	Ubiquitin carboxyl-terminal hydrolase CYLD isoform X2; Belongs to the peptidase C19 family. (972 aa)
	MID1	E3 ubiquitin-protein ligase Midline-1 isoform X1. (675 aa)
	SCTR	Secretin receptor isoform X1; Belongs to the G-protein coupled receptor 2 family. (444 aa)
	KIF18B	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (860 aa)
	REEP2	Receptor expression-enhancing protein. (155 aa)
	ENSVVUP00000023184	annotation not available (119 aa)
	CCDC173	Coiled-coil domain-containing protein 173. (680 aa)
	CFAP45	Cilia- and flagella-associated protein 45. (549 aa)
	TMEM214	Transmembrane protein 214. (685 aa)
	MAPRE3	Microtubule-associated protein RP/EB family member 3 isoform X1. (281 aa)
	CFAP126	Protein Flattop isoform X2. (223 aa)
	AFMID	Kynurenine formamidase; Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation. Kynurenine may be further oxidized to nicotinic acid, NAD(H) and NADP(H). Required for elimination of toxic metabolites. (439 aa)
	SELENOS	Selenoprotein S. (188 aa)
	CFAP53	Cilia- and flagella-associated protein 53. (713 aa)
	SYBU	Syntabulin isoform X1. (661 aa)
	PACRGL	PACRG-like protein isoform X2. (248 aa)
	CUNH4orf47	UPF0602 protein C4orf47 homolog. (310 aa)
	LOC112916372	Tetratricopeptide repeat protein 30B. (664 aa)
	BICD1	Protein bicaudal D homolog 1 isoform X1. (877 aa)
	ENKD1	Enkurin domain-containing protein 1. (346 aa)
	EFHC2	EF-hand domain-containing family member C2. (748 aa)
	TEKT4	Tektin-4. (506 aa)
	MAPRE1	Microtubule-associated protein RP/EB family member 1. (195 aa)
	HID1	Protein HID1. (825 aa)
	LOC112916369	Tetratricopeptide repeat protein 30B-like. (665 aa)
	MTUS2	Microtubule-associated tumor suppressor candidate 2 isoform X1. (1381 aa)
	REEP3	Receptor expression-enhancing protein. (312 aa)
	ENSVVUP00000011611	annotation not available (205 aa)
	SNPH	Syntaphilin isoform X2. (494 aa)
	MAP10	Microtubule-associated protein 10. (863 aa)
	ENSVVUP00000009373	annotation not available (154 aa)
	CCSAP	Centriole, cilia and spindle-associated protein. (270 aa)
	REEP4	Receptor expression-enhancing protein. (257 aa)
	SRPRB	Signal recognition particle receptor subunit beta. (271 aa)
	SAXO2	Stabilizer of axonemal microtubules 2. (398 aa)

Your Current Organism:

Vulpes vulpes

NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APC2	FBXW11	ENSVVUP00000031477	ENSVVUP00000003303	Adenomatous polyposis coli protein 2.	F-box/WD repeat-containing protein 11 isoform X2.	0.610
APC2	MAPRE3	ENSVVUP00000031477	ENSVVUP00000021832	Adenomatous polyposis coli protein 2.	Microtubule-associated protein RP/EB family member 3 isoform X1.	0.428
BCL10	CYLD	ENSVVUP00000042367	ENSVVUP00000026379	B-cell lymphoma/leukemia 10.	Ubiquitin carboxyl-terminal hydrolase CYLD isoform X2; Belongs to the peptidase C19 family.	0.497
BICD1	DYNC1H1	ENSVVUP00000017040	ENSVVUP00000040088	Protein bicaudal D homolog 1 isoform X1.	Cytoplasmic dynein 1 heavy chain 1.	0.743
BICD1	DYNC1H1-2	ENSVVUP00000017040	ENSVVUP00000040092	Protein bicaudal D homolog 1 isoform X1.	Cytoplasmic dynein 1 heavy chain 1.	0.743
BICD1	PAFAH1B1	ENSVVUP00000017040	ENSVVUP00000029974	Protein bicaudal D homolog 1 isoform X1.	Platelet-activating factor acetylhydrolase IB subunit alpha; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. Required during brain development for the proliferation of neuronal precursors and the migration of newly formed neurons from the ven [...]	0.638
C1orf189	CCDC173	ENSVVUP00000040097	ENSVVUP00000022655	Uncharacterized protein C1orf189 homolog.	Coiled-coil domain-containing protein 173.	0.842
C1orf189	CFAP126	ENSVVUP00000040097	ENSVVUP00000021371	Uncharacterized protein C1orf189 homolog.	Protein Flattop isoform X2.	0.842
C1orf189	CFAP161	ENSVVUP00000040097	ENSVVUP00000006284	Uncharacterized protein C1orf189 homolog.	Cilia- and flagella-associated protein 161 isoform X1.	0.583
C1orf189	CFAP20	ENSVVUP00000040097	ENSVVUP00000032743	Uncharacterized protein C1orf189 homolog.	Cilia- and flagella-associated protein 20.	0.842
C1orf189	CFAP45	ENSVVUP00000040097	ENSVVUP00000022230	Uncharacterized protein C1orf189 homolog.	Cilia- and flagella-associated protein 45.	0.842
C1orf189	CFAP53	ENSVVUP00000040097	ENSVVUP00000019316	Uncharacterized protein C1orf189 homolog.	Cilia- and flagella-associated protein 53.	0.842
C1orf189	CUNH15orf65	ENSVVUP00000040097	ENSVVUP00000000696	Uncharacterized protein C1orf189 homolog.	Uncharacterized protein C15orf65 homolog.	0.842
C1orf189	CUNH19orf71	ENSVVUP00000040097	ENSVVUP00000004173	Uncharacterized protein C1orf189 homolog.	Uncharacterized protein C19orf71 homolog isoform X1.	0.842
C1orf189	CUNH1orf158	ENSVVUP00000040097	ENSVVUP00000040498	Uncharacterized protein C1orf189 homolog.	Uncharacterized protein C1orf158 homolog.	0.842
C1orf189	CUNH1orf194	ENSVVUP00000040097	ENSVVUP00000001007	Uncharacterized protein C1orf189 homolog.	Uncharacterized protein C1orf194 homolog.	0.754
C1orf189	CUNH9orf116	ENSVVUP00000040097	ENSVVUP00000038651	Uncharacterized protein C1orf189 homolog.	UPF0691 protein C9orf116 homolog isoform X1.	0.842
C1orf189	CUNH9orf135	ENSVVUP00000040097	ENSVVUP00000005136	Uncharacterized protein C1orf189 homolog.	Protein C9orf135 homolog.	0.842
C1orf189	EFHB	ENSVVUP00000040097	ENSVVUP00000000538	Uncharacterized protein C1orf189 homolog.	EF-hand domain-containing family member B.	0.842
C1orf189	EFHC1	ENSVVUP00000040097	ENSVVUP00000000051	Uncharacterized protein C1orf189 homolog.	EF-hand domain-containing protein 1.	0.842