STRINGSTRING
APOE APOE ZDHHC8 ZDHHC8 APOA1 APOA1 ABCG4 ABCG4 PTCH1 PTCH1 ABCA7 ABCA7 NR1H2 NR1H2 TREM2 TREM2 GPS2 GPS2 EEPD1 EEPD1 NR1H3 NR1H3 NFKBIA NFKBIA SIRT1 SIRT1 PLTP PLTP PON1 PON1 ADIPOQ ADIPOQ CAV1 CAV1 ABCA12 ABCA12
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APOEApolipoprotein E. (336 aa)
ZDHHC8Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (759 aa)
APOA1Apolipoprotein A-I. (266 aa)
ABCG4ATP-binding cassette sub-family G member 4. (646 aa)
PTCH1Protein patched homolog 1 isoform X3. (1386 aa)
ABCA7ATP-binding cassette sub-family A member 7. (2042 aa)
NR1H2Oxysterols receptor LXR-beta. (457 aa)
TREM2Triggering receptor expressed on myeloid cells 2 isoform X1. (404 aa)
GPS2G protein pathway suppressor 2. (327 aa)
EEPD1Endonuclease/exonuclease/phosphatase family domain-containing protein 1. (569 aa)
NR1H3Oxysterols receptor LXR-alpha. (447 aa)
NFKBIANF-kappa-B inhibitor alpha. (327 aa)
SIRT1NAD-dependent protein deacetylase sirtuin-1. (769 aa)
PLTPPhospholipid transfer protein. (495 aa)
PON1Serum paraoxonase/arylesterase 1. (355 aa)
ADIPOQAdiponectin. (266 aa)
CAV1Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (178 aa)
ABCA12ATP-binding cassette sub-family A member 12. (2609 aa)
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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