84 items (Vulpes vulpes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	STMN2	Stathmin; Belongs to the stathmin family. (179 aa)
	PSRC1	Proline/serine-rich coiled-coil protein 1 isoform X1. (364 aa)
	CAMSAP2	Calmodulin-regulated spectrin-associated protein 2 isoform X2. (1491 aa)
	ATXN7L2	Ataxin-7-like protein 2 isoform X3. (695 aa)
	STMND1	Stathmin domain-containing protein 1 isoform X2. (271 aa)
	CDKN1C	Cyclin-dependent kinase inhibitor 1C. (165 aa)
	EML2	Echinoderm microtubule-associated protein-like 2 isoform X1. (849 aa)
	STMN4	Stathmin-4 isoform X1. (216 aa)
	SLC39A12	Zinc transporter ZIP12 isoform X4. (602 aa)
	DCTN1	Dynactin subunit 1 isoform X6. (1285 aa)
	CDKN1B	Cyclin-dependent kinase inhibitor 1B. (198 aa)
	HDGFL3	Hepatoma-derived growth factor-related protein 3. (203 aa)
	TM6SF1	Transmembrane 6 superfamily member 1 isoform X1. (332 aa)
	MAPRE1-2	Microtubule-associated protein RP/EB family member 1. (126 aa)
	ARHGEF2	Rho guanine nucleotide exchange factor 2 isoform X3. (1175 aa)
	FES	Tyrosine-protein kinase; Belongs to the protein kinase superfamily. Tyr protein kinase family. Fes/fps subfamily. (852 aa)
	CDH5	Cadherin-5; Cadherins are calcium-dependent cell adhesion proteins. (771 aa)
	CIB1	Calcium and integrin-binding protein 1. (259 aa)
	ENSVVUP00000008924	annotation not available (159 aa)
	OCLN	Occludin; May play a role in the formation and regulation of the tight junction (TJ) paracellular permeability barrier. Belongs to the ELL/occludin family. (560 aa)
	TBCD	Tubulin-specific chaperone D. (1127 aa)
	ENSVVUP00000009373	annotation not available (154 aa)
	LOC112908207	Microtubule-associated protein 1B-like. (103 aa)
	MAP1B	Microtubule-associated protein 1B. (2412 aa)
	ENSVVUP00000010271	annotation not available (483 aa)
	SKA3	Spindle and kinetochore-associated protein 3. (375 aa)
	SPAST	Spastin; ATP-dependent microtubule severing protein that specifically recognizes and cuts microtubules that are polyglutamylated. Preferentially recognizes and acts on microtubules decorated with short polyglutamate tails: severing activity increases as the number of glutamates per tubulin rises from one to eight, but decreases beyond this glutamylation threshold. Severing activity is not dependent on tubulin acetylation or detyrosination. Microtubule severing promotes reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation [...] (540 aa)
	TTBK2	Tau-tubulin kinase 2 isoform X1. (1244 aa)
	MAP1A	Microtubule-associated protein 1A isoform X1. (3040 aa)
	NAV3	Neuron navigator 3 isoform X1. (2355 aa)
	MAP1S	Microtubule-associated protein 1S isoform X1. (1035 aa)
	SKA1	Spindle and kinetochore-associated protein 1. (119 aa)
	MAPRE1	Microtubule-associated protein RP/EB family member 1. (195 aa)
	MID1IP1	Mid1-interacting protein 1. (183 aa)
	STMN1	Stathmin; Belongs to the stathmin family. (149 aa)
	PRUNE1	Exopolyphosphatase PRUNE1 isoform X1. (453 aa)
	CDK5RAP2	CDK5 regulatory subunit-associated protein 2. (1889 aa)
	ENSVVUP00000016757	annotation not available (63 aa)
	APC	Adenomatous polyposis coli protein isoform X1. (2862 aa)
	CLIP3	CAP-Gly domain-containing linker protein 3. (671 aa)
	SLAIN1	SLAIN motif-containing protein 1. (399 aa)
	SKA1-2	Spindle and kinetochore-associated protein 1. (104 aa)
	ATXN7L1-2	Ataxin-7-like protein 1 isoform X5. (185 aa)
	ATXN7L1	Ataxin-7-like protein 1 isoform X1. (849 aa)
	ATXN7	Ataxin-7 isoform X2. (748 aa)
	STMN3	Stathmin; Belongs to the stathmin family. (372 aa)
	MAPRE3	Microtubule-associated protein RP/EB family member 3 isoform X1. (281 aa)
	ENSVVUP00000021885	annotation not available (135 aa)
	HDAC6	Histone deacetylase 6 isoform X1. (1185 aa)
	CLIP1	CAP-Gly domain-containing linker protein 1 isoform X3. (2183 aa)
	FKBP4	Peptidylprolyl isomerase. (459 aa)
	ENSVVUP00000025132	annotation not available (150 aa)
	CUNH16orf45-2	Uncharacterized protein C16orf45 homolog. (125 aa)
	CUNH16orf45	Uncharacterized protein C16orf45 homolog. (139 aa)
	ENSVVUP00000027818	annotation not available (269 aa)
	GAS2L2	LOW QUALITY PROTEIN: GAS2-like protein 2. (655 aa)
	GIT1	ARF GTPase-activating protein GIT1. (798 aa)
	ENSVVUP00000030475	annotation not available (321 aa)
	LOC112913617	Heat shock 70 kDa protein 1; Belongs to the heat shock protein 70 family. (642 aa)
	GBA2	Non-lysosomal glucosylceramidase; Non-lysosomal glucosylceramidase that catalyzes the hydrolysis of glucosylceramide (GlcCer) to free glucose and ceramide. (925 aa)
	APC2	Adenomatous polyposis coli protein 2. (1719 aa)
	PAK1	Non-specific serine/threonine protein kinase. (544 aa)
	KATNB1	Katanin p80 WD40 repeat-containing subunit B1; Participates in a complex which severs microtubules in an ATP-dependent manner. May act to target the enzymatic subunit of this complex to sites of action such as the centrosome. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. Microtubule release from the mitotic spindle poles may allow depolymerization of the microtubule end proximal to the spindle pole, leading to poleward microtubule flux and poleward motion of chromosome. Micr [...] (655 aa)
	SLAIN2	SLAIN motif-containing protein 2 isoform X1. (608 aa)
	RPS3	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (243 aa)
	SPEF1	Sperm flagellar protein 1. (236 aa)
	ENSVVUP00000034938	annotation not available (125 aa)
	DYRK1A	Dual specificity tyrosine-phosphorylation-regulated kinase 1A isoform X1. (763 aa)
	NUMA1	Nuclear mitotic apparatus protein 1. (2153 aa)
	ENSVVUP00000035680	annotation not available (126 aa)
	GAS2L1	GAS2-like protein 1 isoform X2. (718 aa)
	CKAP5	Cytoskeleton-associated protein 5 isoform X1. (2033 aa)
	CKAP2	LOW QUALITY PROTEIN: cytoskeleton-associated protein 2-like. (605 aa)
	CAMSAP3	LOW QUALITY PROTEIN: calmodulin-regulated spectrin-associated protein 3. (1163 aa)
	CAMSAP1	Calmodulin-regulated spectrin-associated protein 1. (1576 aa)
	ARL2	ADP-ribosylation factor-like protein 2 isoform X3; Belongs to the small GTPase superfamily. Arf family. (184 aa)
	MAPRE2	Microtubule-associated protein RP/EB family member 2 isoform X1. (493 aa)
	ABL1	Tyrosine-protein kinase. (1150 aa)
	ANKRD53	Ankyrin repeat domain-containing protein 53. (489 aa)
	RANGRF	Ran guanine nucleotide release factor isoform X1. (186 aa)
	ENSVVUP00000040212	annotation not available (169 aa)
	MECP2	Methyl-CpG-binding protein 2; Chromosomal protein that binds to methylated DNA. It can bind specifically to a single methyl-CpG pair. It is not influenced by sequences flanking the methyl-CpGs. Binds both 5-methylcytosine (5mC) and 5-hydroxymethylcytosine (5hmC)-containing DNA, with a preference for 5-methylcytosine (5mC). (507 aa)
	ENSVVUP00000042834	annotation not available (353 aa)
	LOC112912050	Myomegalin-like isoform X8. (1120 aa)

Your Current Organism:

Vulpes vulpes

NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APC	ENSVVUP00000009373	ENSVVUP00000016896	ENSVVUP00000009373	Adenomatous polyposis coli protein isoform X1.	annotation not available	0.503
APC	ENSVVUP00000034938	ENSVVUP00000016896	ENSVVUP00000034938	Adenomatous polyposis coli protein isoform X1.	annotation not available	0.503
APC	ENSVVUP00000035680	ENSVVUP00000016896	ENSVVUP00000035680	Adenomatous polyposis coli protein isoform X1.	annotation not available	0.503
APC	ENSVVUP00000040212	ENSVVUP00000016896	ENSVVUP00000040212	Adenomatous polyposis coli protein isoform X1.	annotation not available	0.503
APC	MAPRE1	ENSVVUP00000016896	ENSVVUP00000015197	Adenomatous polyposis coli protein isoform X1.	Microtubule-associated protein RP/EB family member 1.	0.503
APC	MAPRE1-2	ENSVVUP00000016896	ENSVVUP00000007158	Adenomatous polyposis coli protein isoform X1.	Microtubule-associated protein RP/EB family member 1.	0.503
APC2	MAPRE3	ENSVVUP00000031477	ENSVVUP00000021832	Adenomatous polyposis coli protein 2.	Microtubule-associated protein RP/EB family member 3 isoform X1.	0.428
ARHGEF2	MAP1S	ENSVVUP00000007584	ENSVVUP00000014041	Rho guanine nucleotide exchange factor 2 isoform X3.	Microtubule-associated protein 1S isoform X1.	0.525
ARL2	TBCD	ENSVVUP00000038612	ENSVVUP00000009318	ADP-ribosylation factor-like protein 2 isoform X3; Belongs to the small GTPase superfamily. Arf family.	Tubulin-specific chaperone D.	0.898
ATXN7	TTBK2	ENSVVUP00000020013	ENSVVUP00000012305	Ataxin-7 isoform X2.	Tau-tubulin kinase 2 isoform X1.	0.542
ATXN7L1	ATXN7L1-2	ENSVVUP00000019548	ENSVVUP00000019534	Ataxin-7-like protein 1 isoform X1.	Ataxin-7-like protein 1 isoform X5.	0.896
ATXN7L1	TTBK2	ENSVVUP00000019548	ENSVVUP00000012305	Ataxin-7-like protein 1 isoform X1.	Tau-tubulin kinase 2 isoform X1.	0.464
ATXN7L1-2	ATXN7L1	ENSVVUP00000019534	ENSVVUP00000019548	Ataxin-7-like protein 1 isoform X5.	Ataxin-7-like protein 1 isoform X1.	0.896
ATXN7L1-2	TTBK2	ENSVVUP00000019534	ENSVVUP00000012305	Ataxin-7-like protein 1 isoform X5.	Tau-tubulin kinase 2 isoform X1.	0.464
ATXN7L2	TTBK2	ENSVVUP00000003328	ENSVVUP00000012305	Ataxin-7-like protein 2 isoform X3.	Tau-tubulin kinase 2 isoform X1.	0.719
CAMSAP1	CLIP1	ENSVVUP00000038159	ENSVVUP00000024223	Calmodulin-regulated spectrin-associated protein 1.	CAP-Gly domain-containing linker protein 1 isoform X3.	0.527
CAMSAP1	KATNB1	ENSVVUP00000038159	ENSVVUP00000032634	Calmodulin-regulated spectrin-associated protein 1.	Katanin p80 WD40 repeat-containing subunit B1; Participates in a complex which severs microtubules in an ATP-dependent manner. May act to target the enzymatic subunit of this complex to sites of action such as the centrosome. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. Microtubule release from the mitotic spindle poles may allow depolymerization of the microtubule end proximal to the spindle pole, leading to poleward microtubule flux and poleward motion of chromosome. Micr [...]	0.641
CAMSAP2	CLIP1	ENSVVUP00000001449	ENSVVUP00000024223	Calmodulin-regulated spectrin-associated protein 2 isoform X2.	CAP-Gly domain-containing linker protein 1 isoform X3.	0.471
CAMSAP2	KATNB1	ENSVVUP00000001449	ENSVVUP00000032634	Calmodulin-regulated spectrin-associated protein 2 isoform X2.	Katanin p80 WD40 repeat-containing subunit B1; Participates in a complex which severs microtubules in an ATP-dependent manner. May act to target the enzymatic subunit of this complex to sites of action such as the centrosome. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. Microtubule release from the mitotic spindle poles may allow depolymerization of the microtubule end proximal to the spindle pole, leading to poleward microtubule flux and poleward motion of chromosome. Micr [...]	0.503
CAMSAP2	MAPRE2	ENSVVUP00000001449	ENSVVUP00000038641	Calmodulin-regulated spectrin-associated protein 2 isoform X2.	Microtubule-associated protein RP/EB family member 2 isoform X1.	0.424