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NUDT21-2 NUDT21-2 ZNF473 ZNF473 NCBP1 NCBP1 ENSVVUP00000024568 ENSVVUP00000024568 CSTF1 CSTF1 PCF11 PCF11 CLP1 CLP1 CSTF3 CSTF3 SLBP SLBP APLP1 APLP1 NUDT21 NUDT21 ENSVVUP00000018876 ENSVVUP00000018876 ENSVVUP00000018862 ENSVVUP00000018862 CDC73 CDC73 SSU72-2 SSU72-2 PAPOLG PAPOLG CPSF6 CPSF6 PNPT1 PNPT1 NCBP2L NCBP2L CPSF4L CPSF4L RPRD2 RPRD2 CPSF4 CPSF4 WDR33 WDR33 SCAF8 SCAF8 PAF1 PAF1 PAPOLB PAPOLB CPSF1 CPSF1 CPSF7 CPSF7 CSTF2 CSTF2 SSU72 SSU72 TMEM240 TMEM240 SYMPK SYMPK AHCYL1 AHCYL1 CSTF2T CSTF2T ENSVVUP00000003220 ENSVVUP00000003220 CPSF3 CPSF3 MTPAP MTPAP LEO1 LEO1 TUT1 TUT1 RPRD1B RPRD1B PAPOLA PAPOLA RPRD1A RPRD1A ENSVVUP00000036102 ENSVVUP00000036102 TENT2 TENT2 FIP1L1 FIP1L1 CPSF2 CPSF2 MBLAC1 MBLAC1 LSM10 LSM10 ZC3H3 ZC3H3 ENSVVUP00000030373 ENSVVUP00000030373
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
NUDT21-2Cleavage and polyadenylation specificity factor subunit 5. (183 aa)
ZNF473Zinc finger protein 473 isoform X1. (879 aa)
NCBP1Nuclear cap-binding protein subunit 1 isoform X1. (790 aa)
ENSVVUP00000024568annotation not available (203 aa)
CSTF1Cleavage stimulation factor subunit 1. (431 aa)
PCF11pre-mRNA cleavage complex 2 protein Pcf11 isoform X1. (1686 aa)
CLP1Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...] (439 aa)
CSTF3Cleavage stimulation factor subunit 3. (719 aa)
SLBPHistone RNA hairpin-binding protein. (545 aa)
APLP1Amyloid-like protein 1. (643 aa)
NUDT21Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (213 aa)
ENSVVUP00000018876annotation not available (133 aa)
ENSVVUP00000018862annotation not available (176 aa)
CDC73Parafibromin isoform X1. (543 aa)
SSU72-2RNA polymerase II subunit A C-terminal domain phosphatase SSU72. (194 aa)
PAPOLGpoly(A) polymerase gamma isoform X1. (809 aa)
CPSF6Cleavage and polyadenylation specificity factor subunit 6. (536 aa)
PNPT1Polyribonucleotide nucleotidyltransferase 1, mitochondrial. (784 aa)
NCBP2LNuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (141 aa)
CPSF4LCleavage and polyadenylation specific factor 4 like. (162 aa)
RPRD2Regulation of nuclear pre-mRNA domain-containing protein 2 isoform X1. (1479 aa)
CPSF4Cleavage and polyadenylation specificity factor subunit 4 isoform X2. (244 aa)
WDR33pre-mRNA 3' end processing protein WDR33 isoform X1. (1376 aa)
SCAF8Protein SCAF8. (1270 aa)
PAF1RNA polymerase II-associated factor 1 homolog. (721 aa)
PAPOLBPoly(A) polymerase beta. (339 aa)
CPSF1Cleavage and polyadenylation specificity factor subunit 1. (198 aa)
CPSF7Cleavage and polyadenylation specificity factor subunit 7 isoform X1. (562 aa)
CSTF2Cleavage stimulation factor subunit 2 isoform X3. (577 aa)
SSU72RNA polymerase II subunit A C-terminal domain phosphatase SSU72. (194 aa)
TMEM240Transmembrane protein 240 isoform X2. (171 aa)
SYMPKSymplekin. (1149 aa)
AHCYL1Adenosylhomocysteinase. (556 aa)
CSTF2TCleavage stimulation factor subunit 2 tau variant. (422 aa)
ENSVVUP00000003220annotation not available (326 aa)
CPSF3Cleavage and polyadenylation specificity factor subunit 3 isoform X1. (684 aa)
MTPAPpoly(A) RNA polymerase, mitochondrial. (584 aa)
LEO1RNA polymerase-associated protein LEO1. (665 aa)
TUT1Speckle targeted PIP5K1A-regulated poly(A) polymerase isoform X2. (873 aa)
RPRD1BRegulation of nuclear pre-mRNA domain-containing protein 1B. (326 aa)
PAPOLAPoly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (739 aa)
RPRD1ARegulation of nuclear pre-mRNA domain-containing protein 1A isoform X1. (312 aa)
ENSVVUP00000036102annotation not available (194 aa)
TENT2poly(A) RNA polymerase GLD2 isoform X2. (480 aa)
FIP1L1pre-mRNA 3'-end-processing factor FIP1 isoform X1. (603 aa)
CPSF2Cleavage and polyadenylation specificity factor subunit 2. (782 aa)
MBLAC1Metallo-beta-lactamase domain-containing protein 1. (261 aa)
LSM10U7 snRNA-associated Sm-like protein LSm10. (123 aa)
ZC3H3Zinc finger CCCH domain-containing protein 3. (942 aa)
ENSVVUP00000030373annotation not available (194 aa)
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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