STRINGSTRING
ENSVVUP00000000309 ENSVVUP00000000309 ENSVVUP00000042332 ENSVVUP00000042332 ENSVVUP00000041148 ENSVVUP00000041148 CDC5L CDC5L DHX35 DHX35 WDR25 WDR25 RBMXL2 RBMXL2 LOC112930179 LOC112930179 SYF2 SYF2 SRRM1 SRRM1 SNRNP200 SNRNP200 XAB2 XAB2 SART1 SART1 SF3B2 SF3B2 HNRNPR HNRNPR HNRNPU HNRNPU PPIL1 PPIL1 AQR AQR DDX41 DDX41 SF3B1 SF3B1 ENSVVUP00000035926 ENSVVUP00000035926 SNRPB SNRPB PLRG1 PLRG1 RBMX RBMX ENSVVUP00000033508 ENSVVUP00000033508 WDR83 WDR83 LOC112910823 LOC112910823 ESS2 ESS2 SF3A3 SF3A3 PRPF8 PRPF8 ENSVVUP00000029221 ENSVVUP00000029221 MTREX MTREX PNN PNN PPIL2 PPIL2 SYNCRIP SYNCRIP DDX23 DDX23 SNRPG-2 SNRPG-2 SNRPD3 SNRPD3 SNRPF SNRPF PPIL3 PPIL3 PRPF4B PRPF4B ENSVVUP00000025427 ENSVVUP00000025427 ZCCHC8 ZCCHC8 ISY1 ISY1 EFTUD2 EFTUD2 EIF4A3 EIF4A3 SNRPN SNRPN SF3B3 SF3B3 DHX38 DHX38 DHX8 DHX8 ENSVVUP00000022877 ENSVVUP00000022877 GPATCH1 GPATCH1 LSM2 LSM2 TFIP11 TFIP11 ENSVVUP00000020918 ENSVVUP00000020918 PRPF6 PRPF6 SNRPA1 SNRPA1 SNRNP40 SNRNP40 SNRPB2 SNRPB2 EIF4A2 EIF4A2 PABPC1 PABPC1 CWC15-2 CWC15-2 CRNKL1 CRNKL1 SRSF1 SRSF1 CWC15 CWC15 ENSVVUP00000015561 ENSVVUP00000015561 SF3B6 SF3B6 ENSVVUP00000013765 ENSVVUP00000013765 CWC22 CWC22 BCAS2 BCAS2 BUD31 BUD31 SRRM2 SRRM2 ENSVVUP00000011260 ENSVVUP00000011260 RBM8A RBM8A LSM3 LSM3 RBM22 RBM22 LOC112908923 LOC112908923 LOC112919010 LOC112919010 ENSVVUP00000008648 ENSVVUP00000008648 CDC40 CDC40 DDX5 DDX5 ENSVVUP00000008070 ENSVVUP00000008070 PPWD1 PPWD1 ENSVVUP00000007492 ENSVVUP00000007492 CUNH19orf54 CUNH19orf54 CWC27 CWC27 ENSVVUP00000007289 ENSVVUP00000007289 PRPF19 PRPF19 LOC112908211 LOC112908211 LOC112908264 LOC112908264 MAGOHB MAGOHB SNW1 SNW1 SNRPD1 SNRPD1 SLU7 SLU7 CACTIN CACTIN SNRPD2 SNRPD2 ENSVVUP00000004016 ENSVVUP00000004016 SF3A1 SF3A1 SNRPG SNRPG LSM7 LSM7 SF3A2 SF3A2 ENSVVUP00000002443 ENSVVUP00000002443 RBM44 RBM44 ENSVVUP00000001085 ENSVVUP00000001085 ENSVVUP00000001067 ENSVVUP00000001067 ENSVVUP00000000470 ENSVVUP00000000470 MAGOH MAGOH
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSVVUP00000000309annotation not available (109 aa)
ENSVVUP00000042332annotation not available (107 aa)
ENSVVUP00000041148annotation not available (102 aa)
CDC5LCell division cycle 5-like protein. (802 aa)
DHX35Probable ATP-dependent RNA helicase DHX35. (771 aa)
WDR25WD repeat-containing protein 25. (539 aa)
RBMXL2RNA-binding motif protein, X-linked-like-2. (88 aa)
LOC112930179pre-mRNA-splicing factor SYF2-like. (248 aa)
SYF2pre-mRNA-splicing factor SYF2. (246 aa)
SRRM1LOW QUALITY PROTEIN: serine/arginine repetitive matrix protein 1. (903 aa)
SNRNP200U5 small nuclear ribonucleoprotein 200 kDa helicase. (2141 aa)
XAB2pre-mRNA-splicing factor SYF1. (885 aa)
SART1U4/U6.U5 tri-snRNP-associated protein 1. (806 aa)
SF3B2Splicing factor 3B subunit 2 isoform X1. (895 aa)
HNRNPRHeterogeneous nuclear ribonucleoprotein R isoform X2. (615 aa)
HNRNPUHeterogeneous nuclear ribonucleoprotein U isoform X2. (806 aa)
PPIL1Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (276 aa)
AQRRNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing. (1484 aa)
DDX41Probable ATP-dependent RNA helicase DDX41. (649 aa)
SF3B1Splicing factor 3B subunit 1 isoform X1. (1379 aa)
ENSVVUP00000035926annotation not available (197 aa)
SNRPBSmall nuclear ribonucleoprotein-associated protein. (240 aa)
PLRG1Pleiotropic regulator 1 isoform X1. (515 aa)
RBMXRNA-binding motif protein, X chromosome. (352 aa)
ENSVVUP00000033508annotation not available (98 aa)
WDR83WD repeat domain-containing protein 83 isoform X1. (315 aa)
LOC112910823Small nuclear ribonucleoprotein F. (78 aa)
ESS2Splicing factor ESS-2 homolog. (478 aa)
SF3A3LOW QUALITY PROTEIN: splicing factor 3A subunit 3. (484 aa)
PRPF8pre-mRNA-processing-splicing factor 8. (2360 aa)
ENSVVUP00000029221annotation not available (69 aa)
MTREXExosome RNA helicase MTR4. (1042 aa)
PNNPinin. (765 aa)
PPIL2RING-type E3 ubiquitin-protein ligase PPIL2. (514 aa)
SYNCRIPHeterogeneous nuclear ribonucleoprotein Q isoform X2. (562 aa)
DDX23Probable ATP-dependent RNA helicase DDX23. (820 aa)
SNRPG-2Small nuclear ribonucleoprotein G. (76 aa)
SNRPD3Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. (201 aa)
SNRPFSmall nuclear ribonucleoprotein F. (295 aa)
PPIL3Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (143 aa)
PRPF4BSerine/threonine-protein kinase PRP4 homolog isoform X1. (1042 aa)
ENSVVUP00000025427annotation not available (98 aa)
ZCCHC8Zinc finger CCHC domain-containing protein 8 isoform X1. (773 aa)
ISY1pre-mRNA-splicing factor ISY1 homolog. (285 aa)
EFTUD2116 kDa U5 small nuclear ribonucleoprotein component. (972 aa)
EIF4A3Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family. (411 aa)
SNRPNSmall nuclear ribonucleoprotein-associated protein. (244 aa)
SF3B3Splicing factor 3B subunit 3. (1217 aa)
DHX38pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16. (1226 aa)
DHX8ATP-dependent RNA helicase DHX8. (1260 aa)
ENSVVUP00000022877annotation not available (117 aa)
GPATCH1G patch domain-containing protein 1. (931 aa)
LSM2U6 snRNA-associated Sm-like protein LSm2. (81 aa)
TFIP11Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Intron turnover seems to proceed through reactions in two lariat-intron associated complexes termed Intron Large (IL) and Intron Small (IS). In cooperation with DHX15 seems to mediate the transition of the U2, U5 and U6 snRNP- containing IL complex to the snRNP-free IS complex leading to efficient debranching and turnover of excised introns. May play a role in the differentiation of ameloblasts and odontoblasts or in the forming of the enamel extrac [...] (766 aa)
ENSVVUP00000020918annotation not available (110 aa)
PRPF6pre-mRNA-processing factor 6. (941 aa)
SNRPA1U2 small nuclear ribonucleoprotein A. (255 aa)
SNRNP40U5 small nuclear ribonucleoprotein 40 kDa protein. (358 aa)
SNRPB2U2 small nuclear ribonucleoprotein B'' isoform X1. (250 aa)
EIF4A2Eukaryotic initiation factor 4A-II; Belongs to the DEAD box helicase family. (407 aa)
PABPC1Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (565 aa)
CWC15-2Spliceosome-associated protein CWC15 homolog isoform X3. (231 aa)
CRNKL1Crooked neck-like protein 1. (834 aa)
SRSF1Serine/arginine-rich splicing factor 1. (253 aa)
CWC15Spliceosome-associated protein CWC15 homolog isoform X1. (226 aa)
ENSVVUP00000015561annotation not available (77 aa)
SF3B6Splicing factor 3B subunit 6. (125 aa)
ENSVVUP00000013765annotation not available (205 aa)
CWC22pre-mRNA-splicing factor CWC22 homolog isoform X1. (907 aa)
BCAS2pre-mRNA-splicing factor SPF27. (225 aa)
BUD31Protein BUD31 homolog. (144 aa)
SRRM2Serine/arginine repetitive matrix protein 2 isoform X1. (2754 aa)
ENSVVUP00000011260annotation not available (186 aa)
RBM8ARNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (174 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (112 aa)
RBM22pre-mRNA-splicing factor RBM22. (420 aa)
LOC112908923Protein FRG1. (275 aa)
LOC112919010RNA-binding motif, single-stranded-interacting protein 2-like. (200 aa)
ENSVVUP00000008648annotation not available (102 aa)
CDC40pre-mRNA-processing factor 17. (663 aa)
DDX5Probable ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family. (614 aa)
ENSVVUP00000008070annotation not available (93 aa)
PPWD1Peptidylprolyl isomerase domain and WD repeat-containing protein 1 isoform X1. (646 aa)
ENSVVUP00000007492annotation not available (102 aa)
CUNH19orf54UPF0692 protein C19orf54 homolog isoform X1. (336 aa)
CWC27Spliceosome-associated protein CWC27 homolog. (472 aa)
ENSVVUP00000007289annotation not available (69 aa)
PRPF19pre-mRNA-processing factor 19. (504 aa)
LOC112908211Peptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (375 aa)
LOC112908264Protein mago nashi homolog. (144 aa)
MAGOHBProtein mago nashi homolog 2. (148 aa)
SNW1SNW domain-containing protein 1. (536 aa)
SNRPD1Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. (112 aa)
SLU7pre-mRNA-splicing factor SLU7. (633 aa)
CACTINCactin. (752 aa)
SNRPD2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (112 aa)
ENSVVUP00000004016annotation not available (75 aa)
SF3A1Splicing factor 3A subunit 1. (793 aa)
SNRPGSmall nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (76 aa)
LSM7U6 snRNA-associated Sm-like protein LSm7. (109 aa)
SF3A2Splicing factor 3A subunit 2. (478 aa)
ENSVVUP00000002443annotation not available (290 aa)
RBM44RNA-binding protein 44. (1050 aa)
ENSVVUP00000001085annotation not available (87 aa)
ENSVVUP00000001067annotation not available (72 aa)
ENSVVUP00000000470annotation not available (62 aa)
MAGOHProtein mago nashi homolog. (146 aa)
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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