STRINGSTRING
CSTF2T CSTF2T CSTF2 CSTF2 CPSF7 CPSF7 CPSF4 CPSF4 CPSF4L CPSF4L NCBP2L NCBP2L CPSF6 CPSF6 ENSVVUP00000018862 ENSVVUP00000018862 ENSVVUP00000018876 ENSVVUP00000018876 NUDT21 NUDT21 NCBP1 NCBP1 NUDT21-2 NUDT21-2 CPSF2 CPSF2 TUT1 TUT1 FIP1L1 FIP1L1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CSTF2TCleavage stimulation factor subunit 2 tau variant. (422 aa)
CSTF2Cleavage stimulation factor subunit 2 isoform X3. (577 aa)
CPSF7Cleavage and polyadenylation specificity factor subunit 7 isoform X1. (562 aa)
CPSF4Cleavage and polyadenylation specificity factor subunit 4 isoform X2. (244 aa)
CPSF4LCleavage and polyadenylation specific factor 4 like. (162 aa)
NCBP2LNuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (141 aa)
CPSF6Cleavage and polyadenylation specificity factor subunit 6. (536 aa)
ENSVVUP00000018862annotation not available (176 aa)
ENSVVUP00000018876annotation not available (133 aa)
NUDT21Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (213 aa)
NCBP1Nuclear cap-binding protein subunit 1 isoform X1. (790 aa)
NUDT21-2Cleavage and polyadenylation specificity factor subunit 5. (183 aa)
CPSF2Cleavage and polyadenylation specificity factor subunit 2. (782 aa)
TUT1Speckle targeted PIP5K1A-regulated poly(A) polymerase isoform X2. (873 aa)
FIP1L1pre-mRNA 3'-end-processing factor FIP1 isoform X1. (603 aa)
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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