STRINGSTRING
SNRPE-2 SNRPE-2 SLU7 SLU7 ENSVVUP00000004665 ENSVVUP00000004665 SNRPG-2 SNRPG-2 ENSVVUP00000004662 ENSVVUP00000004662 SNRNP70 SNRNP70 CUNH19orf54 CUNH19orf54 ENSVVUP00000007492 ENSVVUP00000007492 ENSVVUP00000007974 ENSVVUP00000007974 ENSVVUP00000008070 ENSVVUP00000008070 ENSVVUP00000008648 ENSVVUP00000008648 LOC112906954 LOC112906954 LSM3 LSM3 ENSVVUP00000010769 ENSVVUP00000010769 LSM4 LSM4 GEMIN7 GEMIN7 SART3 SART3 PRPF31 PRPF31 ENSVVUP00000011260 ENSVVUP00000011260 PRPF3 PRPF3 RBMX2 RBMX2 LSM6 LSM6 GEMIN8 GEMIN8 ENSVVUP00000013551 ENSVVUP00000013551 ENSVVUP00000013765 ENSVVUP00000013765 ENSVVUP00000014288 ENSVVUP00000014288 ENSVVUP00000014399 ENSVVUP00000014399 SF3A3 SF3A3 LSM10 LSM10 MEPCE MEPCE CLNS1A CLNS1A LOC112910823 LOC112910823 ENSVVUP00000033012 ENSVVUP00000033012 ENSVVUP00000033508 ENSVVUP00000033508 HTATSF1 HTATSF1 SNRPB SNRPB ENSVVUP00000035926 ENSVVUP00000035926 SF3B1 SF3B1 CD2BP2 CD2BP2 ENSVVUP00000036461 ENSVVUP00000036461 DDX39A DDX39A SF3B2 SF3B2 SART1 SART1 SNRNP200 SNRNP200 SF3B6 SF3B6 LUC7L3 LUC7L3 ENSVVUP00000015561 ENSVVUP00000015561 ENSVVUP00000016755 ENSVVUP00000016755 LSM8 LSM8 LUC7L LUC7L SNRPB2 SNRPB2 ENSVVUP00000019225 ENSVVUP00000019225 SNRNP40 SNRNP40 SNRPA1 SNRPA1 ENSVVUP00000020147 ENSVVUP00000020147 PRPF6 PRPF6 SNRPE SNRPE RBM42 RBM42 DDX20 DDX20 LSM2 LSM2 ENSVVUP00000022877 ENSVVUP00000022877 SNRPC SNRPC PRPF40B PRPF40B PRPF8 PRPF8 GEMIN4 GEMIN4 LSM5 LSM5 PRPF40A PRPF40A SNRNP27 SNRNP27 ENSVVUP00000039810 ENSVVUP00000039810 ENSVVUP00000041148 ENSVVUP00000041148 GEMIN2 GEMIN2 ENSVVUP00000028270 ENSVVUP00000028270 DDX39B DDX39B LSM1 LSM1 PHF5A PHF5A SNU13 SNU13 STRAP STRAP PRPF4 PRPF4 SNRPD2 SNRPD2 ENSVVUP00000004016 ENSVVUP00000004016 SF3A1 SF3A1 SNRPG SNRPG LSM7 LSM7 SF3A2 SF3A2 LOC112906999 LOC112906999 LARP7 LARP7 USP39 USP39 ENSVVUP00000001557 ENSVVUP00000001557 ENSVVUP00000001085 ENSVVUP00000001085 ENSVVUP00000001067 ENSVVUP00000001067 FMR1 FMR1 PRPF39 PRPF39 ENSVVUP00000000470 ENSVVUP00000000470 ENSVVUP00000000200 ENSVVUP00000000200 DDX23 DDX23 SNRPA SNRPA ENSVVUP00000007289 ENSVVUP00000007289 TXNL4A-2 TXNL4A-2 PRPF18 PRPF18 SF3B5 SF3B5 ZMAT2 ZMAT2 TXNL4B TXNL4B SF3B3 SF3B3 SNRPN SNRPN EFTUD2 EFTUD2 HEXIM1 HEXIM1 ENSVVUP00000025079 ENSVVUP00000025079 ENSVVUP00000025167 ENSVVUP00000025167 ARFGEF1 ARFGEF1 GEMIN6 GEMIN6 TXNL4A TXNL4A SNRPF SNRPF SNRPD3 SNRPD3 GEMIN5 GEMIN5 SNRPD1 SNRPD1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SNRPE-2Small nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (94 aa)
SLU7pre-mRNA-splicing factor SLU7. (633 aa)
ENSVVUP00000004665annotation not available (88 aa)
SNRPG-2Small nuclear ribonucleoprotein G. (76 aa)
ENSVVUP00000004662annotation not available (77 aa)
SNRNP70U1 small nuclear ribonucleoprotein 70 kDa isoform X1. (438 aa)
CUNH19orf54UPF0692 protein C19orf54 homolog isoform X1. (336 aa)
ENSVVUP00000007492annotation not available (102 aa)
ENSVVUP00000007974annotation not available (128 aa)
ENSVVUP00000008070annotation not available (93 aa)
ENSVVUP00000008648annotation not available (102 aa)
LOC112906954Survival motor neuron protein isoform X1. (318 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (112 aa)
ENSVVUP00000010769annotation not available (73 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (195 aa)
GEMIN7Gem-associated protein 7. (131 aa)
SART3Squamous cell carcinoma antigen recognized by T-cells 3 isoform X2. (964 aa)
PRPF31U4/U6 small nuclear ribonucleoprotein Prp31. (499 aa)
ENSVVUP00000011260annotation not available (186 aa)
PRPF3U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1. (692 aa)
RBMX2RNA-binding motif protein, X-linked 2. (343 aa)
LSM6U6 snRNA-associated Sm-like protein LSm6. (117 aa)
GEMIN8Gem-associated protein 8 isoform X1. (333 aa)
ENSVVUP00000013551annotation not available (165 aa)
ENSVVUP00000013765annotation not available (205 aa)
ENSVVUP00000014288annotation not available (180 aa)
ENSVVUP00000014399annotation not available (159 aa)
SF3A3LOW QUALITY PROTEIN: splicing factor 3A subunit 3. (484 aa)
LSM10U7 snRNA-associated Sm-like protein LSm10. (123 aa)
MEPCE7SK snRNA methylphosphate capping enzyme. (695 aa)
CLNS1AMethylosome subunit pICln. (236 aa)
LOC112910823Small nuclear ribonucleoprotein F. (78 aa)
ENSVVUP00000033012annotation not available (105 aa)
ENSVVUP00000033508annotation not available (98 aa)
HTATSF1HIV Tat-specific factor 1 isoform X1. (769 aa)
SNRPBSmall nuclear ribonucleoprotein-associated protein. (240 aa)
ENSVVUP00000035926annotation not available (197 aa)
SF3B1Splicing factor 3B subunit 1 isoform X1. (1379 aa)
CD2BP2CD2 antigen cytoplasmic tail-binding protein 2 isoform X1. (365 aa)
ENSVVUP00000036461annotation not available (165 aa)
DDX39AATP-dependent RNA helicase DDX39A. (427 aa)
SF3B2Splicing factor 3B subunit 2 isoform X1. (895 aa)
SART1U4/U6.U5 tri-snRNP-associated protein 1. (806 aa)
SNRNP200U5 small nuclear ribonucleoprotein 200 kDa helicase. (2141 aa)
SF3B6Splicing factor 3B subunit 6. (125 aa)
LUC7L3Luc7-like protein 3 isoform X2. (472 aa)
ENSVVUP00000015561annotation not available (77 aa)
ENSVVUP00000016755annotation not available (62 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (91 aa)
LUC7LPutative RNA-binding protein Luc7-like 1 isoform X2. (646 aa)
SNRPB2U2 small nuclear ribonucleoprotein B'' isoform X1. (250 aa)
ENSVVUP00000019225annotation not available (112 aa)
SNRNP40U5 small nuclear ribonucleoprotein 40 kDa protein. (358 aa)
SNRPA1U2 small nuclear ribonucleoprotein A. (255 aa)
ENSVVUP00000020147annotation not available (94 aa)
PRPF6pre-mRNA-processing factor 6. (941 aa)
SNRPESmall nuclear ribonucleoprotein E. (92 aa)
RBM42RNA-binding protein 42 isoform X1. (468 aa)
DDX20Probable ATP-dependent RNA helicase DDX20. (819 aa)
LSM2U6 snRNA-associated Sm-like protein LSm2. (81 aa)
ENSVVUP00000022877annotation not available (117 aa)
SNRPCU1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] (159 aa)
PRPF40Bpre-mRNA-processing factor 40 homolog B isoform X1. (883 aa)
PRPF8pre-mRNA-processing-splicing factor 8. (2360 aa)
GEMIN4Gem-associated protein 4. (1059 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (91 aa)
PRPF40Apre-mRNA-processing factor 40 homolog A isoform X2. (994 aa)
SNRNP27Small nuclear ribonucleoprotein U4/U6.U5 subunit 27. (176 aa)
ENSVVUP00000039810annotation not available (49 aa)
ENSVVUP00000041148annotation not available (102 aa)
GEMIN2Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. (280 aa)
ENSVVUP00000028270annotation not available (53 aa)
DDX39BSpliceosome RNA helicase DDX39B isoform X1. (463 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Plays a role in the degradation of histone mRNAs, the only eukaryotic mRNAs that are not polyadenylated. Probably also part of an LSm subunits-containing complex involved in the general process of mRNA degradation. (133 aa)
PHF5APHD finger-like domain-containing protein 5A. (110 aa)
SNU13Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (145 aa)
STRAPSerine-threonine kinase receptor-associated protein. (350 aa)
PRPF4U4/U6 small nuclear ribonucleoprotein Prp4. (525 aa)
SNRPD2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (112 aa)
ENSVVUP00000004016annotation not available (75 aa)
SF3A1Splicing factor 3A subunit 1. (793 aa)
SNRPGSmall nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (76 aa)
LSM7U6 snRNA-associated Sm-like protein LSm7. (109 aa)
SF3A2Splicing factor 3A subunit 2. (478 aa)
LOC112906999Putative RNA-binding protein Luc7-like 2 isoform X1. (408 aa)
LARP7La-related protein 7 isoform X1. (579 aa)
USP39U4/U6.U5 tri-snRNP-associated protein 2 isoform X1. (563 aa)
ENSVVUP00000001557annotation not available (118 aa)
ENSVVUP00000001085annotation not available (87 aa)
ENSVVUP00000001067annotation not available (72 aa)
FMR1Synaptic functional regulator FMR1 isoform X1. (599 aa)
PRPF39pre-mRNA-processing factor 39 isoform X1. (667 aa)
ENSVVUP00000000470annotation not available (62 aa)
ENSVVUP00000000200annotation not available (73 aa)
DDX23Probable ATP-dependent RNA helicase DDX23. (820 aa)
SNRPAU1 small nuclear ribonucleoprotein A. (282 aa)
ENSVVUP00000007289annotation not available (69 aa)
TXNL4A-2Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (99 aa)
PRPF18pre-mRNA-splicing factor 18 isoform X1. (351 aa)
SF3B5Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
ZMAT2Zinc finger matrin-type protein 2. (199 aa)
TXNL4BThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (149 aa)
SF3B3Splicing factor 3B subunit 3. (1217 aa)
SNRPNSmall nuclear ribonucleoprotein-associated protein. (244 aa)
EFTUD2116 kDa U5 small nuclear ribonucleoprotein component. (972 aa)
HEXIM1Protein HEXIM1. (359 aa)
ENSVVUP00000025079annotation not available (79 aa)
ENSVVUP00000025167annotation not available (118 aa)
ARFGEF1Brefeldin A-inhibited guanine nucleotide-exchange protein 1. (1738 aa)
GEMIN6Gem-associated protein 6 isoform X2. (166 aa)
TXNL4AThioredoxin-like protein 4A isoform X2. (227 aa)
SNRPFSmall nuclear ribonucleoprotein F. (295 aa)
SNRPD3Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. (201 aa)
GEMIN5Gem-associated protein 5 isoform X1. (1508 aa)
SNRPD1Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. (112 aa)
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.