STRINGSTRING
WBP4 WBP4 ENSVVUP00000040311 ENSVVUP00000040311 CTNNBL1 CTNNBL1 LGALS3 LGALS3 ENSVVUP00000042332 ENSVVUP00000042332 DDX41 DDX41 SNRPB SNRPB HNRNPM HNRNPM CWF19L1 CWF19L1 RBMX RBMX ENSVVUP00000033012 ENSVVUP00000033012 WDR83 WDR83 LOC112910823 LOC112910823 ESS2 ESS2 SRRM3 SRRM3 CLNS1A CLNS1A SNIP1 SNIP1 SF3A3 SF3A3 SNRNP70 SNRNP70 ENSVVUP00000031555 ENSVVUP00000031555 GLB1 GLB1 SNRPC SNRPC PTBP2 PTBP2 PRPF8 PRPF8 SMU1 SMU1 PRPF40A PRPF40A DDX39B DDX39B DDX23 DDX23 SNRPG-2 SNRPG-2 SNRPD3 SNRPD3 SNRPF SNRPF PPIL3 PPIL3 PRPF4B PRPF4B TXNL4A TXNL4A ENSVVUP00000025189 ENSVVUP00000025189 ENSVVUP00000025167 ENSVVUP00000025167 ZCCHC8 ZCCHC8 ISY1 ISY1 EFTUD2 EFTUD2 EIF4A3 EIF4A3 GPKOW GPKOW DHX38 DHX38 DHX8 DHX8 ZMAT2 ZMAT2 ZCRB1 ZCRB1 ENSVVUP00000022877 ENSVVUP00000022877 GPATCH1 GPATCH1 TFIP11 TFIP11 ENSVVUP00000020918 ENSVVUP00000020918 SNRPA1 SNRPA1 SNRNP40 SNRNP40 ENSVVUP00000018972 ENSVVUP00000018972 SNRNP25 SNRNP25 IK IK LUC7L LUC7L DHX15 DHX15 SF3A2 SF3A2 LOC112906999 LOC112906999 CWC25 CWC25 ENSVVUP00000002443 ENSVVUP00000002443 ADAR ADAR ENSVVUP00000001557 ENSVVUP00000001557 ENSVVUP00000001067 ENSVVUP00000001067 CWC15-2 CWC15-2 CRNKL1 CRNKL1 ENSVVUP00000016755 ENSVVUP00000016755 LOC112928885 LOC112928885 RNF113A RNF113A CWC15 CWC15 ENSVVUP00000015561 ENSVVUP00000015561 ENSVVUP00000015434 ENSVVUP00000015434 LUC7L3 LUC7L3 SF3B6 SF3B6 MFAP1 MFAP1 ENSVVUP00000000755 ENSVVUP00000000755 AAR2 AAR2 PRPF38B PRPF38B PRPF39 PRPF39 ENSVVUP00000000470 ENSVVUP00000000470 RNPC3 RNPC3 ENSVVUP00000000309 ENSVVUP00000000309 ALYREF ALYREF ENSVVUP00000014399 ENSVVUP00000014399 ENSVVUP00000014288 ENSVVUP00000014288 UBE2J1 UBE2J1 ENSVVUP00000013551 ENSVVUP00000013551 DHX16 DHX16 CWC22 CWC22 RBM41 RBM41 HNRNPC HNRNPC RBMX2 RBMX2 BUD31 BUD31 SRRM2 SRRM2 ENSVVUP00000011260 ENSVVUP00000011260 YJU2 YJU2 LOC112919020 LOC112919020 RBM22 RBM22 ZNF865 ZNF865 U2AF2 U2AF2 LOC112919010 LOC112919010 CDC40 CDC40 PPWD1 PPWD1 CWC27 CWC27 ENSVVUP00000007289 ENSVVUP00000007289 TXNL4A-2 TXNL4A-2 PRPF18 PRPF18 LOC112908211 LOC112908211 SNRNP48 SNRNP48 EFL1 EFL1 SF3B5 SF3B5 CCDC12 CCDC12 LOC112925673 LOC112925673 PRPF38A PRPF38A SNW1 SNW1 SLU7 SLU7 GCFC2 GCFC2 ZMAT5 ZMAT5 SNRPD2 SNRPD2 SF3A1 SF3A1 SNRPG SNRPG ENSVVUP00000036461 ENSVVUP00000036461 UHRF1BP1 UHRF1BP1 AQR AQR PPIL1 PPIL1 CCDC130 CCDC130 DDX39A DDX39A XAB2 XAB2 SNRNP200 SNRNP200 SRRM1 SRRM1 SYF2 SYF2 LOC112930179 LOC112930179 KMT5A KMT5A RBMXL2 RBMXL2 WDR25 WDR25 SF1 SF1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
WBP4WW domain-binding protein 4 isoform X1. (282 aa)
ENSVVUP00000040311annotation not available (80 aa)
CTNNBL1Beta-catenin-like protein 1 isoform X1. (587 aa)
LGALS3Galectin. (336 aa)
ENSVVUP00000042332annotation not available (107 aa)
DDX41Probable ATP-dependent RNA helicase DDX41. (649 aa)
SNRPBSmall nuclear ribonucleoprotein-associated protein. (240 aa)
HNRNPMHeterogeneous nuclear ribonucleoprotein M isoform X7. (754 aa)
CWF19L1CWF19-like protein 1 isoform X1. (538 aa)
RBMXRNA-binding motif protein, X chromosome. (352 aa)
ENSVVUP00000033012annotation not available (105 aa)
WDR83WD repeat domain-containing protein 83 isoform X1. (315 aa)
LOC112910823Small nuclear ribonucleoprotein F. (78 aa)
ESS2Splicing factor ESS-2 homolog. (478 aa)
SRRM3Serine/arginine repetitive matrix protein 3. (246 aa)
CLNS1AMethylosome subunit pICln. (236 aa)
SNIP1Smad nuclear-interacting protein 1. (397 aa)
SF3A3LOW QUALITY PROTEIN: splicing factor 3A subunit 3. (484 aa)
SNRNP70U1 small nuclear ribonucleoprotein 70 kDa isoform X1. (438 aa)
ENSVVUP00000031555annotation not available (182 aa)
GLB1Beta-galactosidase. (657 aa)
SNRPCU1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] (159 aa)
PTBP2Polypyrimidine tract-binding protein 2 isoform X3. (501 aa)
PRPF8pre-mRNA-processing-splicing factor 8. (2360 aa)
SMU1WD40 repeat-containing protein SMU1 isoform X1. (500 aa)
PRPF40Apre-mRNA-processing factor 40 homolog A isoform X2. (994 aa)
DDX39BSpliceosome RNA helicase DDX39B isoform X1. (463 aa)
DDX23Probable ATP-dependent RNA helicase DDX23. (820 aa)
SNRPG-2Small nuclear ribonucleoprotein G. (76 aa)
SNRPD3Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. (201 aa)
SNRPFSmall nuclear ribonucleoprotein F. (295 aa)
PPIL3Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (143 aa)
PRPF4BSerine/threonine-protein kinase PRP4 homolog isoform X1. (1042 aa)
TXNL4AThioredoxin-like protein 4A isoform X2. (227 aa)
ENSVVUP00000025189annotation not available (102 aa)
ENSVVUP00000025167annotation not available (118 aa)
ZCCHC8Zinc finger CCHC domain-containing protein 8 isoform X1. (773 aa)
ISY1pre-mRNA-splicing factor ISY1 homolog. (285 aa)
EFTUD2116 kDa U5 small nuclear ribonucleoprotein component. (972 aa)
EIF4A3Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family. (411 aa)
GPKOWG-patch domain and KOW motifs-containing protein. (484 aa)
DHX38pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16. (1226 aa)
DHX8ATP-dependent RNA helicase DHX8. (1260 aa)
ZMAT2Zinc finger matrin-type protein 2. (199 aa)
ZCRB1Zinc finger CCHC-type and RNA-binding motif-containing protein 1 isoform X1. (217 aa)
ENSVVUP00000022877annotation not available (117 aa)
GPATCH1G patch domain-containing protein 1. (931 aa)
TFIP11Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Intron turnover seems to proceed through reactions in two lariat-intron associated complexes termed Intron Large (IL) and Intron Small (IS). In cooperation with DHX15 seems to mediate the transition of the U2, U5 and U6 snRNP- containing IL complex to the snRNP-free IS complex leading to efficient debranching and turnover of excised introns. May play a role in the differentiation of ameloblasts and odontoblasts or in the forming of the enamel extrac [...] (766 aa)
ENSVVUP00000020918annotation not available (110 aa)
SNRPA1U2 small nuclear ribonucleoprotein A. (255 aa)
SNRNP40U5 small nuclear ribonucleoprotein 40 kDa protein. (358 aa)
ENSVVUP00000018972annotation not available (110 aa)
SNRNP25U11/U12 small nuclear ribonucleoprotein 25 kDa protein. (123 aa)
IKProtein Red. (845 aa)
LUC7LPutative RNA-binding protein Luc7-like 1 isoform X2. (646 aa)
DHX15pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15. (840 aa)
SF3A2Splicing factor 3A subunit 2. (478 aa)
LOC112906999Putative RNA-binding protein Luc7-like 2 isoform X1. (408 aa)
CWC25pre-mRNA-splicing factor CWC25 homolog. (420 aa)
ENSVVUP00000002443annotation not available (290 aa)
ADARDouble-stranded RNA-specific adenosine deaminase isoform X1. (1177 aa)
ENSVVUP00000001557annotation not available (118 aa)
ENSVVUP00000001067annotation not available (72 aa)
CWC15-2Spliceosome-associated protein CWC15 homolog isoform X3. (231 aa)
CRNKL1Crooked neck-like protein 1. (834 aa)
ENSVVUP00000016755annotation not available (62 aa)
LOC112928885Heterogeneous nuclear ribonucleoprotein C-like isoform X1. (305 aa)
RNF113ARING finger protein 113A. (348 aa)
CWC15Spliceosome-associated protein CWC15 homolog isoform X1. (226 aa)
ENSVVUP00000015561annotation not available (77 aa)
ENSVVUP00000015434annotation not available (1708 aa)
LUC7L3Luc7-like protein 3 isoform X2. (472 aa)
SF3B6Splicing factor 3B subunit 6. (125 aa)
MFAP1Microfibrillar-associated protein 1. (439 aa)
ENSVVUP00000000755annotation not available (105 aa)
AAR2Protein AAR2 homolog. (433 aa)
PRPF38Bpre-mRNA-splicing factor 38B. (549 aa)
PRPF39pre-mRNA-processing factor 39 isoform X1. (667 aa)
ENSVVUP00000000470annotation not available (62 aa)
RNPC3RNA-binding protein 40 isoform X1. (518 aa)
ENSVVUP00000000309annotation not available (109 aa)
ALYREFTHO complex subunit 4. (217 aa)
ENSVVUP00000014399annotation not available (159 aa)
ENSVVUP00000014288annotation not available (180 aa)
UBE2J1Ubiquitin-conjugating enzyme E2 J1. (303 aa)
ENSVVUP00000013551annotation not available (165 aa)
DHX16pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16. (1105 aa)
CWC22pre-mRNA-splicing factor CWC22 homolog isoform X1. (907 aa)
RBM41RNA-binding protein 41 isoform X1. (484 aa)
HNRNPCHeterogeneous nuclear ribonucleoproteins C1/C2 isoform X1. (344 aa)
RBMX2RNA-binding motif protein, X-linked 2. (343 aa)
BUD31Protein BUD31 homolog. (144 aa)
SRRM2Serine/arginine repetitive matrix protein 2 isoform X1. (2754 aa)
ENSVVUP00000011260annotation not available (186 aa)
YJU2YJU2 splicing factor homolog. (338 aa)
LOC112919020LOW QUALITY PROTEIN: U11/U12 small nuclear ribonucleoprotein 35 kDa protein-like. (234 aa)
RBM22pre-mRNA-splicing factor RBM22. (420 aa)
ZNF865LOW QUALITY PROTEIN: zinc finger protein 865. (987 aa)
U2AF2Splicing factor U2AF 65 kDa subunit isoform X2. (683 aa)
LOC112919010RNA-binding motif, single-stranded-interacting protein 2-like. (200 aa)
CDC40pre-mRNA-processing factor 17. (663 aa)
PPWD1Peptidylprolyl isomerase domain and WD repeat-containing protein 1 isoform X1. (646 aa)
CWC27Spliceosome-associated protein CWC27 homolog. (472 aa)
ENSVVUP00000007289annotation not available (69 aa)
TXNL4A-2Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (99 aa)
PRPF18pre-mRNA-splicing factor 18 isoform X1. (351 aa)
LOC112908211Peptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (375 aa)
SNRNP48U11/U12 small nuclear ribonucleoprotein 48 kDa protein. (340 aa)
EFL1Elongation factor-like GTPase 1. (1156 aa)
SF3B5Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
CCDC12Coiled-coil domain-containing protein 12. (166 aa)
LOC112925673RING finger protein 113A-like. (297 aa)
PRPF38Apre-mRNA-splicing factor 38A. (312 aa)
SNW1SNW domain-containing protein 1. (536 aa)
SLU7pre-mRNA-splicing factor SLU7. (633 aa)
GCFC2GC-rich sequence DNA-binding factor 2. (740 aa)
ZMAT5Zinc finger matrin-type protein 5. (170 aa)
SNRPD2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (112 aa)
SF3A1Splicing factor 3A subunit 1. (793 aa)
SNRPGSmall nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (76 aa)
ENSVVUP00000036461annotation not available (165 aa)
UHRF1BP1UHRF1-binding protein 1 isoform X1. (1445 aa)
AQRRNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing. (1484 aa)
PPIL1Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (276 aa)
CCDC130Coiled-coil domain-containing protein 130. (397 aa)
DDX39AATP-dependent RNA helicase DDX39A. (427 aa)
XAB2pre-mRNA-splicing factor SYF1. (885 aa)
SNRNP200U5 small nuclear ribonucleoprotein 200 kDa helicase. (2141 aa)
SRRM1LOW QUALITY PROTEIN: serine/arginine repetitive matrix protein 1. (903 aa)
SYF2pre-mRNA-splicing factor SYF2. (246 aa)
LOC112930179pre-mRNA-splicing factor SYF2-like. (248 aa)
KMT5AN-lysine methyltransferase KMT5A isoform X4. (246 aa)
RBMXL2RNA-binding motif protein, X-linked-like-2. (88 aa)
WDR25WD repeat-containing protein 25. (539 aa)
SF1Splicing factor 1 isoform X9. (548 aa)
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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