STRINGSTRING
ENSVVUP00000000200 ENSVVUP00000000200 RNPC3 RNPC3 ENSVVUP00000000470 ENSVVUP00000000470 ENSVVUP00000001067 ENSVVUP00000001067 ENSVVUP00000001085 ENSVVUP00000001085 USP39 USP39 PPIH PPIH SF3A2 SF3A2 LSM7 LSM7 SNRPG SNRPG SF3A1 SF3A1 SNRPD2 SNRPD2 PRPF4 PRPF4 STRAP STRAP ENSVVUP00000004662 ENSVVUP00000004662 ENSVVUP00000004665 ENSVVUP00000004665 SNRPD1 SNRPD1 SNRPE-2 SNRPE-2 GEMIN5 GEMIN5 TXNL4A-2 TXNL4A-2 ENSVVUP00000007289 ENSVVUP00000007289 SNRPA SNRPA CUNH19orf54 CUNH19orf54 ENSVVUP00000007492 ENSVVUP00000007492 ENSVVUP00000008648 ENSVVUP00000008648 LOC112906954 LOC112906954 TSNAX TSNAX LSM3 LSM3 ENSVVUP00000010769 ENSVVUP00000010769 LSM4 LSM4 SART3 SART3 PRPF31 PRPF31 ENSVVUP00000011202 ENSVVUP00000011202 ENSVVUP00000011260 ENSVVUP00000011260 PRPF3 PRPF3 RBMX2 RBMX2 LSM6 LSM6 GEMIN8 GEMIN8 ENSVVUP00000013765 ENSVVUP00000013765 SF3B6 SF3B6 ENSVVUP00000015561 ENSVVUP00000015561 PPP1R8 PPP1R8 ENSVVUP00000016755 ENSVVUP00000016755 LSM8 LSM8 SNRPB2 SNRPB2 ENSVVUP00000019225 ENSVVUP00000019225 SNRPA1 SNRPA1 CUNH3orf49 CUNH3orf49 SNRPE SNRPE RBM42 RBM42 DDX20 DDX20 LSM2 LSM2 ENSVVUP00000022877 ENSVVUP00000022877 SNRPN SNRPN ENSVVUP00000024977 ENSVVUP00000024977 ENSVVUP00000025079 ENSVVUP00000025079 ARFGEF1 ARFGEF1 TXNL4A TXNL4A SNRPF SNRPF SNRPD3 SNRPD3 SNRPG-2 SNRPG-2 DDX23 DDX23 STAR STAR DDX39B DDX39B ENSVVUP00000028270 ENSVVUP00000028270 GEMIN2 GEMIN2 LSM5 LSM5 GEMIN4 GEMIN4 PRPF8 PRPF8 PRPF40B PRPF40B TRMT13 TRMT13 PDE6C PDE6C SNRNP70 SNRNP70 LSM10 LSM10 CLNS1A CLNS1A LOC112910823 LOC112910823 ENSVVUP00000033012 ENSVVUP00000033012 CHODL CHODL CCDC84 CCDC84 ENSVVUP00000033508 ENSVVUP00000033508 HTATSF1 HTATSF1 SNRPB SNRPB ENSVVUP00000035926 ENSVVUP00000035926 SF3B1 SF3B1 CD2BP2 CD2BP2 DDX39A DDX39A SF3B2 SF3B2 SNRNP200 SNRNP200 ENSVVUP00000039810 ENSVVUP00000039810 ENSVVUP00000041148 ENSVVUP00000041148 ZNF608 ZNF608
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSVVUP00000000200annotation not available (73 aa)
RNPC3RNA-binding protein 40 isoform X1. (518 aa)
ENSVVUP00000000470annotation not available (62 aa)
ENSVVUP00000001067annotation not available (72 aa)
ENSVVUP00000001085annotation not available (87 aa)
USP39U4/U6.U5 tri-snRNP-associated protein 2 isoform X1. (563 aa)
PPIHPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (177 aa)
SF3A2Splicing factor 3A subunit 2. (478 aa)
LSM7U6 snRNA-associated Sm-like protein LSm7. (109 aa)
SNRPGSmall nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (76 aa)
SF3A1Splicing factor 3A subunit 1. (793 aa)
SNRPD2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (112 aa)
PRPF4U4/U6 small nuclear ribonucleoprotein Prp4. (525 aa)
STRAPSerine-threonine kinase receptor-associated protein. (350 aa)
ENSVVUP00000004662annotation not available (77 aa)
ENSVVUP00000004665annotation not available (88 aa)
SNRPD1Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. (112 aa)
SNRPE-2Small nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (94 aa)
GEMIN5Gem-associated protein 5 isoform X1. (1508 aa)
TXNL4A-2Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (99 aa)
ENSVVUP00000007289annotation not available (69 aa)
SNRPAU1 small nuclear ribonucleoprotein A. (282 aa)
CUNH19orf54UPF0692 protein C19orf54 homolog isoform X1. (336 aa)
ENSVVUP00000007492annotation not available (102 aa)
ENSVVUP00000008648annotation not available (102 aa)
LOC112906954Survival motor neuron protein isoform X1. (318 aa)
TSNAXTranslin-associated protein X. (290 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (112 aa)
ENSVVUP00000010769annotation not available (73 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (195 aa)
SART3Squamous cell carcinoma antigen recognized by T-cells 3 isoform X2. (964 aa)
PRPF31U4/U6 small nuclear ribonucleoprotein Prp31. (499 aa)
ENSVVUP00000011202annotation not available (470 aa)
ENSVVUP00000011260annotation not available (186 aa)
PRPF3U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1. (692 aa)
RBMX2RNA-binding motif protein, X-linked 2. (343 aa)
LSM6U6 snRNA-associated Sm-like protein LSm6. (117 aa)
GEMIN8Gem-associated protein 8 isoform X1. (333 aa)
ENSVVUP00000013765annotation not available (205 aa)
SF3B6Splicing factor 3B subunit 6. (125 aa)
ENSVVUP00000015561annotation not available (77 aa)
PPP1R8Nuclear inhibitor of protein phosphatase 1. (351 aa)
ENSVVUP00000016755annotation not available (62 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (91 aa)
SNRPB2U2 small nuclear ribonucleoprotein B'' isoform X1. (250 aa)
ENSVVUP00000019225annotation not available (112 aa)
SNRPA1U2 small nuclear ribonucleoprotein A. (255 aa)
CUNH3orf49Uncharacterized protein. (294 aa)
SNRPESmall nuclear ribonucleoprotein E. (92 aa)
RBM42RNA-binding protein 42 isoform X1. (468 aa)
DDX20Probable ATP-dependent RNA helicase DDX20. (819 aa)
LSM2U6 snRNA-associated Sm-like protein LSm2. (81 aa)
ENSVVUP00000022877annotation not available (117 aa)
SNRPNSmall nuclear ribonucleoprotein-associated protein. (244 aa)
ENSVVUP00000024977annotation not available (309 aa)
ENSVVUP00000025079annotation not available (79 aa)
ARFGEF1Brefeldin A-inhibited guanine nucleotide-exchange protein 1. (1738 aa)
TXNL4AThioredoxin-like protein 4A isoform X2. (227 aa)
SNRPFSmall nuclear ribonucleoprotein F. (295 aa)
SNRPD3Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. (201 aa)
SNRPG-2Small nuclear ribonucleoprotein G. (76 aa)
DDX23Probable ATP-dependent RNA helicase DDX23. (820 aa)
STARSteroidogenic acute regulatory protein, mitochondrial; Plays a key role in steroid hormone synthesis by enhancing the metabolism of cholesterol into pregnenolone. Mediates the transfer of cholesterol from the outer mitochondrial membrane to the inner mitochondrial membrane where it is cleaved to pregnenolone. (339 aa)
DDX39BSpliceosome RNA helicase DDX39B isoform X1. (463 aa)
ENSVVUP00000028270annotation not available (53 aa)
GEMIN2Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. (280 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (91 aa)
GEMIN4Gem-associated protein 4. (1059 aa)
PRPF8pre-mRNA-processing-splicing factor 8. (2360 aa)
PRPF40Bpre-mRNA-processing factor 40 homolog B isoform X1. (883 aa)
TRMT13tRNA:m(4)X modification enzyme TRM13 homolog. (489 aa)
PDE6CPhosphodiesterase. (868 aa)
SNRNP70U1 small nuclear ribonucleoprotein 70 kDa isoform X1. (438 aa)
LSM10U7 snRNA-associated Sm-like protein LSm10. (123 aa)
CLNS1AMethylosome subunit pICln. (236 aa)
LOC112910823Small nuclear ribonucleoprotein F. (78 aa)
ENSVVUP00000033012annotation not available (105 aa)
CHODLChondrolectin isoform X2. (253 aa)
CCDC84Coiled-coil domain-containing protein 84 isoform X4. (336 aa)
ENSVVUP00000033508annotation not available (98 aa)
HTATSF1HIV Tat-specific factor 1 isoform X1. (769 aa)
SNRPBSmall nuclear ribonucleoprotein-associated protein. (240 aa)
ENSVVUP00000035926annotation not available (197 aa)
SF3B1Splicing factor 3B subunit 1 isoform X1. (1379 aa)
CD2BP2CD2 antigen cytoplasmic tail-binding protein 2 isoform X1. (365 aa)
DDX39AATP-dependent RNA helicase DDX39A. (427 aa)
SF3B2Splicing factor 3B subunit 2 isoform X1. (895 aa)
SNRNP200U5 small nuclear ribonucleoprotein 200 kDa helicase. (2141 aa)
ENSVVUP00000039810annotation not available (49 aa)
ENSVVUP00000041148annotation not available (102 aa)
ZNF608Zinc finger protein 608 isoform X1. (1516 aa)
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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