19 items (Vulpes vulpes) - STRING interaction network

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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	LSM7	U6 snRNA-associated Sm-like protein LSm7. (109 aa)
	SNRPG	Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (76 aa)
	SNRPD2	Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (112 aa)
	SNRPD1	Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. (112 aa)
	SNRPE-2	Small nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (94 aa)
	LSM3	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (112 aa)
	LSM4	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (195 aa)
	LSM6	U6 snRNA-associated Sm-like protein LSm6. (117 aa)
	LSM8	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (91 aa)
	LSM2	U6 snRNA-associated Sm-like protein LSm2. (81 aa)
	SNRPN	Small nuclear ribonucleoprotein-associated protein. (244 aa)
	SNRPF	Small nuclear ribonucleoprotein F. (295 aa)
	SNRPD3	Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. (201 aa)
	LSM1	U6 snRNA-associated Sm-like protein LSm1; Plays a role in the degradation of histone mRNAs, the only eukaryotic mRNAs that are not polyadenylated. Probably also part of an LSm subunits-containing complex involved in the general process of mRNA degradation. (133 aa)
	LSM5	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (91 aa)
	LSM10	U7 snRNA-associated Sm-like protein LSm10. (123 aa)
	LOC112910823	Small nuclear ribonucleoprotein F. (78 aa)
	SNRPB	Small nuclear ribonucleoprotein-associated protein. (240 aa)
	NAA38	N-alpha-acetyltransferase 38, NatC auxiliary subunit. (125 aa)

Your Current Organism:

Vulpes vulpes

NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC112910823	LSM1	ENSVVUP00000032939	ENSVVUP00000027482	Small nuclear ribonucleoprotein F.	U6 snRNA-associated Sm-like protein LSm1; Plays a role in the degradation of histone mRNAs, the only eukaryotic mRNAs that are not polyadenylated. Probably also part of an LSm subunits-containing complex involved in the general process of mRNA degradation.	0.505
LOC112910823	LSM10	ENSVVUP00000032939	ENSVVUP00000031960	Small nuclear ribonucleoprotein F.	U7 snRNA-associated Sm-like protein LSm10.	0.968
LOC112910823	LSM2	ENSVVUP00000032939	ENSVVUP00000022183	Small nuclear ribonucleoprotein F.	U6 snRNA-associated Sm-like protein LSm2.	0.966
LOC112910823	LSM3	ENSVVUP00000032939	ENSVVUP00000009900	Small nuclear ribonucleoprotein F.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.770
LOC112910823	LSM4	ENSVVUP00000032939	ENSVVUP00000011011	Small nuclear ribonucleoprotein F.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.911
LOC112910823	LSM5	ENSVVUP00000032939	ENSVVUP00000029175	Small nuclear ribonucleoprotein F.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.945
LOC112910823	LSM6	ENSVVUP00000032939	ENSVVUP00000012623	Small nuclear ribonucleoprotein F.	U6 snRNA-associated Sm-like protein LSm6.	0.908
LOC112910823	LSM7	ENSVVUP00000032939	ENSVVUP00000003399	Small nuclear ribonucleoprotein F.	U6 snRNA-associated Sm-like protein LSm7.	0.941
LOC112910823	LSM8	ENSVVUP00000032939	ENSVVUP00000017992	Small nuclear ribonucleoprotein F.	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.870
LOC112910823	NAA38	ENSVVUP00000032939	ENSVVUP00000039299	Small nuclear ribonucleoprotein F.	N-alpha-acetyltransferase 38, NatC auxiliary subunit.	0.702
LOC112910823	SNRPB	ENSVVUP00000032939	ENSVVUP00000035666	Small nuclear ribonucleoprotein F.	Small nuclear ribonucleoprotein-associated protein.	0.984
LOC112910823	SNRPD1	ENSVVUP00000032939	ENSVVUP00000005104	Small nuclear ribonucleoprotein F.	Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA.	0.999
LOC112910823	SNRPD2	ENSVVUP00000032939	ENSVVUP00000004049	Small nuclear ribonucleoprotein F.	Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome.	0.997
LOC112910823	SNRPD3	ENSVVUP00000032939	ENSVVUP00000026351	Small nuclear ribonucleoprotein F.	Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing.	0.999
LOC112910823	SNRPE-2	ENSVVUP00000032939	ENSVVUP00000005735	Small nuclear ribonucleoprotein F.	Small nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development.	0.923
LOC112910823	SNRPF	ENSVVUP00000032939	ENSVVUP00000025957	Small nuclear ribonucleoprotein F.	Small nuclear ribonucleoprotein F.	0.901
LOC112910823	SNRPG	ENSVVUP00000032939	ENSVVUP00000003669	Small nuclear ribonucleoprotein F.	Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing.	0.991
LOC112910823	SNRPN	ENSVVUP00000032939	ENSVVUP00000024527	Small nuclear ribonucleoprotein F.	Small nuclear ribonucleoprotein-associated protein.	0.961
LSM1	LOC112910823	ENSVVUP00000027482	ENSVVUP00000032939	U6 snRNA-associated Sm-like protein LSm1; Plays a role in the degradation of histone mRNAs, the only eukaryotic mRNAs that are not polyadenylated. Probably also part of an LSm subunits-containing complex involved in the general process of mRNA degradation.	Small nuclear ribonucleoprotein F.	0.505
LSM1	LSM2	ENSVVUP00000027482	ENSVVUP00000022183	U6 snRNA-associated Sm-like protein LSm1; Plays a role in the degradation of histone mRNAs, the only eukaryotic mRNAs that are not polyadenylated. Probably also part of an LSm subunits-containing complex involved in the general process of mRNA degradation.	U6 snRNA-associated Sm-like protein LSm2.	0.984