STRINGSTRING
SIM2 SIM2 NPAS3 NPAS3 HIF1A HIF1A PER1 PER1 NPAS4 NPAS4 PER3 PER3 PER2 PER2 SIM1 SIM1 AHR AHR EPAS1 EPAS1 HIF3A HIF3A NPAS1 NPAS1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SIM2Single-minded homolog 2. (562 aa)
NPAS3Neuronal PAS domain-containing protein 3. (889 aa)
HIF1AHypoxia-inducible factor 1-alpha. (764 aa)
PER1Period circadian protein homolog 1. (1294 aa)
NPAS4Neuronal PAS domain-containing protein 4 isoform X2. (788 aa)
PER3Period circadian protein homolog 3 isoform X2. (1130 aa)
PER2Period circadian protein homolog 2 isoform X1. (1109 aa)
SIM1Single-minded homolog 1. (766 aa)
AHRAryl hydrocarbon receptor. (855 aa)
EPAS1Endothelial PAS domain-containing protein 1. (926 aa)
HIF3AHypoxia-inducible factor 3-alpha isoform X3. (669 aa)
NPAS1Neuronal PAS domain-containing protein 1. (645 aa)
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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