STRINGSTRING
LSM10 LSM10 ENSVVUP00000039810 ENSVVUP00000039810 SNRPB SNRPB LOC112910823 LOC112910823 ENSVVUP00000028270 ENSVVUP00000028270 ZNF473 ZNF473 NCBP1 NCBP1 SNRPG-2 SNRPG-2 SNRPD3 SNRPD3 SNRPF SNRPF ENSVVUP00000025079 ENSVVUP00000025079 SNRPE SNRPE ENSVVUP00000015561 ENSVVUP00000015561 ENSVVUP00000013765 ENSVVUP00000013765 NCBP2L NCBP2L NCBP2 NCBP2 ENSVVUP00000010769 ENSVVUP00000010769 ENSVVUP00000007289 ENSVVUP00000007289 SNRPE-2 SNRPE-2 ENSVVUP00000004016 ENSVVUP00000004016 SNRPG SNRPG ENSVVUP00000001067 ENSVVUP00000001067 ENSVVUP00000000470 ENSVVUP00000000470 ENSVVUP00000000200 ENSVVUP00000000200
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LSM10U7 snRNA-associated Sm-like protein LSm10. (123 aa)
ENSVVUP00000039810annotation not available (49 aa)
SNRPBSmall nuclear ribonucleoprotein-associated protein. (240 aa)
LOC112910823Small nuclear ribonucleoprotein F. (78 aa)
ENSVVUP00000028270annotation not available (53 aa)
ZNF473Zinc finger protein 473 isoform X1. (879 aa)
NCBP1Nuclear cap-binding protein subunit 1 isoform X1. (790 aa)
SNRPG-2Small nuclear ribonucleoprotein G. (76 aa)
SNRPD3Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. (201 aa)
SNRPFSmall nuclear ribonucleoprotein F. (295 aa)
ENSVVUP00000025079annotation not available (79 aa)
SNRPESmall nuclear ribonucleoprotein E. (92 aa)
ENSVVUP00000015561annotation not available (77 aa)
ENSVVUP00000013765annotation not available (205 aa)
NCBP2LNuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (141 aa)
NCBP2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (156 aa)
ENSVVUP00000010769annotation not available (73 aa)
ENSVVUP00000007289annotation not available (69 aa)
SNRPE-2Small nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (94 aa)
ENSVVUP00000004016annotation not available (75 aa)
SNRPGSmall nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (76 aa)
ENSVVUP00000001067annotation not available (72 aa)
ENSVVUP00000000470annotation not available (62 aa)
ENSVVUP00000000200annotation not available (73 aa)
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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