37 items (Vulpes vulpes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	UBE2V1	Ubiquitin-conjugating enzyme E2 variant 1 isoform X3. (105 aa)
	ENSVVUP00000023416	Ubiquitin-conjugating enzyme E2 N-like. (105 aa)
	TAB1	TGF-beta-activated kinase 1 and MAP3K7-binding protein 1. (502 aa)
	MAP3K7	Mitogen-activated protein kinase kinase kinase 7; Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. MAP kinase kinase kinase subfamily. (606 aa)
	MAP3K20	Mitogen-activated protein kinase kinase kinase 20 isoform X1. (509 aa)
	MAP3K20-2	Mitogen-activated protein kinase kinase kinase 20 isoform X2. (487 aa)
	CASP2	Caspase-2 isoform X1; Belongs to the peptidase C14A family. (460 aa)
	LOC112932868	Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. (140 aa)
	ENSVVUP00000014764	annotation not available (139 aa)
	BIRC2	Baculoviral IAP repeat-containing protein 2. (459 aa)
	BIRC3	Baculoviral IAP repeat-containing protein 3. (604 aa)
	RPS27A	ubiquitin-40S ribosomal protein S27a. (156 aa)
	MAP2K6	Dual specificity mitogen-activated protein kinase kinase 6 isoform X1; Belongs to the protein kinase superfamily. (334 aa)
	UBA52	ubiquitin-60S ribosomal protein L40. (231 aa)
	TAB3	TGF-beta-activated kinase 1 and MAP3K7-binding protein 3 isoform X1. (717 aa)
	AAMP	Angio-associated migratory cell protein isoform X2. (435 aa)
	LOC112928967	Ubiquitin-conjugating enzyme E2 N-like; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
	TRAF6	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (541 aa)
	LOC112921655	Ubiquitin-conjugating enzyme E2 N-like; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
	TAB2	TGF-beta-activated kinase 1 and MAP3K7-binding protein 2. (693 aa)
	ITCH	E3 ubiquitin-protein ligase. (1100 aa)
	TNFAIP3	Tumor necrosis factor alpha-induced protein 3 isoform X2. (854 aa)
	RIPK2	Receptor-interacting serine/threonine-protein kinase 2; Serine/threonine/tyrosine kinase that plays an essential role in modulation of innate and adaptive immune responses. Upon stimulation by bacterial peptidoglycans, NOD1 and NOD2 are activated, oligomerize and recruit RIPK2 through CARD-CARD domains. (538 aa)
	ENSVVUP00000024657	annotation not available (103 aa)
	CASP8	Caspase-8; Belongs to the peptidase C14A family. (397 aa)
	NOD2	Nucleotide-binding oligomerization domain-containing protein 2. (1043 aa)
	CYLD	Ubiquitin carboxyl-terminal hydrolase CYLD isoform X2; Belongs to the peptidase C19 family. (972 aa)
	ENSVVUP00000027292	Ubiquitin-conjugating enzyme E2 N-like. (146 aa)
	NOD1	Nucleotide-binding oligomerization domain-containing protein 1. (953 aa)
	ENSVVUP00000023942	Ubiquitin-conjugating enzyme E2 N-like. (93 aa)
	MAPK12	Mitogen-activated protein kinase. (348 aa)
	MAPK11	Mitogen-activated protein kinase. (332 aa)
	MAPK14	Mitogen-activated protein kinase. (360 aa)
	MAPK13	Mitogen-activated protein kinase. (413 aa)
	ENSVVUP00000040094	annotation not available (128 aa)
	CASP9	Caspase-9 isoform X1; Belongs to the peptidase C14A family. (495 aa)
	IKBKG	NF-kappa-B essential modulator isoform X1. (419 aa)

Your Current Organism:

Vulpes vulpes

NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AAMP	NOD1	ENSVVUP00000009965	ENSVVUP00000028666	Angio-associated migratory cell protein isoform X2.	Nucleotide-binding oligomerization domain-containing protein 1.	0.589
AAMP	NOD2	ENSVVUP00000009965	ENSVVUP00000026370	Angio-associated migratory cell protein isoform X2.	Nucleotide-binding oligomerization domain-containing protein 2.	0.923
BIRC2	BIRC3	ENSVVUP00000014618	ENSVVUP00000014441	Baculoviral IAP repeat-containing protein 2.	Baculoviral IAP repeat-containing protein 3.	0.912
BIRC2	CASP2	ENSVVUP00000014618	ENSVVUP00000018062	Baculoviral IAP repeat-containing protein 2.	Caspase-2 isoform X1; Belongs to the peptidase C14A family.	0.601
BIRC2	CASP8	ENSVVUP00000014618	ENSVVUP00000025809	Baculoviral IAP repeat-containing protein 2.	Caspase-8; Belongs to the peptidase C14A family.	0.472
BIRC2	CASP9	ENSVVUP00000014618	ENSVVUP00000040619	Baculoviral IAP repeat-containing protein 2.	Caspase-9 isoform X1; Belongs to the peptidase C14A family.	0.976
BIRC2	CYLD	ENSVVUP00000014618	ENSVVUP00000026379	Baculoviral IAP repeat-containing protein 2.	Ubiquitin carboxyl-terminal hydrolase CYLD isoform X2; Belongs to the peptidase C19 family.	0.580
BIRC2	ENSVVUP00000014764	ENSVVUP00000014618	ENSVVUP00000014764	Baculoviral IAP repeat-containing protein 2.	annotation not available	0.710
BIRC2	ENSVVUP00000023416	ENSVVUP00000014618	ENSVVUP00000023416	Baculoviral IAP repeat-containing protein 2.	Ubiquitin-conjugating enzyme E2 N-like.	0.407
BIRC2	ENSVVUP00000023942	ENSVVUP00000014618	ENSVVUP00000023942	Baculoviral IAP repeat-containing protein 2.	Ubiquitin-conjugating enzyme E2 N-like.	0.407
BIRC2	ENSVVUP00000024657	ENSVVUP00000014618	ENSVVUP00000024657	Baculoviral IAP repeat-containing protein 2.	annotation not available	0.407
BIRC2	ENSVVUP00000027292	ENSVVUP00000014618	ENSVVUP00000027292	Baculoviral IAP repeat-containing protein 2.	Ubiquitin-conjugating enzyme E2 N-like.	0.407
BIRC2	ENSVVUP00000040094	ENSVVUP00000014618	ENSVVUP00000040094	Baculoviral IAP repeat-containing protein 2.	annotation not available	0.616
BIRC2	IKBKG	ENSVVUP00000014618	ENSVVUP00000041502	Baculoviral IAP repeat-containing protein 2.	NF-kappa-B essential modulator isoform X1.	0.693
BIRC2	LOC112921655	ENSVVUP00000014618	ENSVVUP00000008132	Baculoviral IAP repeat-containing protein 2.	Ubiquitin-conjugating enzyme E2 N-like; Belongs to the ubiquitin-conjugating enzyme family.	0.407
BIRC2	LOC112928967	ENSVVUP00000014618	ENSVVUP00000009355	Baculoviral IAP repeat-containing protein 2.	Ubiquitin-conjugating enzyme E2 N-like; Belongs to the ubiquitin-conjugating enzyme family.	0.407
BIRC2	LOC112932868	ENSVVUP00000014618	ENSVVUP00000018057	Baculoviral IAP repeat-containing protein 2.	Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.	0.407
BIRC2	MAP3K20	ENSVVUP00000014618	ENSVVUP00000018721	Baculoviral IAP repeat-containing protein 2.	Mitogen-activated protein kinase kinase kinase 20 isoform X1.	0.572
BIRC2	MAP3K20-2	ENSVVUP00000014618	ENSVVUP00000018708	Baculoviral IAP repeat-containing protein 2.	Mitogen-activated protein kinase kinase kinase 20 isoform X2.	0.572
BIRC2	MAP3K7	ENSVVUP00000014618	ENSVVUP00000019114	Baculoviral IAP repeat-containing protein 2.	Mitogen-activated protein kinase kinase kinase 7; Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. MAP kinase kinase kinase subfamily.	0.930