STRINGSTRING
NUP153 NUP153 ALYREF ALYREF MAGOH MAGOH CASC3 CASC3 EIF4E1B EIF4E1B CPSF3 CPSF3 POLDIP3 POLDIP3 SYMPK SYMPK MAGOHB MAGOHB LOC112908264 LOC112908264 NUP43 NUP43 LOC112925667 LOC112925667 LOC112925669 LOC112925669 ENSVVUP00000007784 ENSVVUP00000007784 SREK1 SREK1 CPSF1 CPSF1 NUP155 NUP155 NUP205 NUP205 NUP133 NUP133 RBM8A RBM8A EIF4E EIF4E NUP58 NUP58 SRSF11 SRSF11 NCBP2 NCBP2 WDR33 WDR33 CPSF4 CPSF4 RNPS1 RNPS1 CPSF4L CPSF4L NUP62CL NUP62CL NCBP2L NCBP2L NUP107 NUP107 NXT2 NXT2 TPR TPR ENSVVUP00000015200 ENSVVUP00000015200 NUP85 NUP85 NXF3 NXF3 C12orf50 C12orf50 UPF3B UPF3B NXT1 NXT1 SEH1L SEH1L SLBP SLBP GLE1 GLE1 NUP35 NUP35 RAE1 RAE1 NUP37 NUP37 EIF4A3 EIF4A3 ENSVVUP00000024568 ENSVVUP00000024568 NUP210 NUP210 ENSVVUP00000025427 ENSVVUP00000025427 NCBP1 NCBP1 RANBP2 RANBP2 NUP93 NUP93 EIF4E-2 EIF4E-2 NUP160 NUP160 SHLD1 SHLD1 SEC13 SEC13 NUP54 NUP54 CPSF2 CPSF2 LOC112935781 LOC112935781 FIP1L1 FIP1L1 NUP98 NUP98 NDC1 NDC1 NUP188 NUP188 SRRM1 SRRM1 NUP88 NUP88 NUP214 NUP214 AAAS AAAS NUP50 NUP50 NUP210L NUP210L NXF1 NXF1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
NUP153Nuclear pore complex protein Nup153. (1478 aa)
ALYREFTHO complex subunit 4. (217 aa)
MAGOHProtein mago nashi homolog. (146 aa)
CASC3Protein CASC3. (703 aa)
EIF4E1BEukaryotic translation initiation factor 4E type 1B; Belongs to the eukaryotic initiation factor 4E family. (241 aa)
CPSF3Cleavage and polyadenylation specificity factor subunit 3 isoform X1. (684 aa)
POLDIP3Polymerase delta-interacting protein 3 isoform X1. (421 aa)
SYMPKSymplekin. (1149 aa)
MAGOHBProtein mago nashi homolog 2. (148 aa)
LOC112908264Protein mago nashi homolog. (144 aa)
NUP43Nucleoporin Nup43. (380 aa)
LOC112925667Nuclear RNA export factor 2-like. (726 aa)
LOC112925669Nuclear RNA export factor 2-like. (615 aa)
ENSVVUP00000007784annotation not available (132 aa)
SREK1Splicing regulatory glutamine/lysine-rich protein 1 isoform X4. (198 aa)
CPSF1Cleavage and polyadenylation specificity factor subunit 1. (198 aa)
NUP155Nuclear pore complex protein Nup155 isoform X1. (1391 aa)
NUP205Nuclear pore complex protein Nup205 isoform X1. (2033 aa)
NUP133Nuclear pore complex protein Nup133. (1182 aa)
RBM8ARNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (174 aa)
EIF4EEukaryotic translation initiation factor 4E isoform X2; Belongs to the eukaryotic initiation factor 4E family. (302 aa)
NUP58Nucleoporin p58/p45 isoform X2. (667 aa)
SRSF11Serine/arginine-rich splicing factor 11 isoform X1. (424 aa)
NCBP2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (156 aa)
WDR33pre-mRNA 3' end processing protein WDR33 isoform X1. (1376 aa)
CPSF4Cleavage and polyadenylation specificity factor subunit 4 isoform X2. (244 aa)
RNPS1RNA-binding protein with serine-rich domain 1 isoform X1. (305 aa)
CPSF4LCleavage and polyadenylation specific factor 4 like. (162 aa)
NUP62CLNucleoporin-62 C-terminal-like protein isoform X1. (179 aa)
NCBP2LNuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (141 aa)
NUP107Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (927 aa)
NXT2NTF2-related export protein 2 isoform X1. (199 aa)
TPRNucleoprotein TPR. (2511 aa)
ENSVVUP00000015200annotation not available (525 aa)
NUP85Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (659 aa)
NXF3Nuclear RNA export factor 3. (584 aa)
C12orf50Uncharacterized protein C12orf50 homolog isoform X1. (415 aa)
UPF3BRegulator of nonsense transcripts 3B isoform X2. (464 aa)
NXT1NTF2-related export protein 1. (140 aa)
SEH1LNucleoporin SEH1 isoform X3; Belongs to the WD repeat SEC13 family. (478 aa)
SLBPHistone RNA hairpin-binding protein. (545 aa)
GLE1Nucleoporin GLE1. (698 aa)
NUP35Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (356 aa)
RAE1mRNA export factor. (371 aa)
NUP37Nucleoporin Nup37. (326 aa)
EIF4A3Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family. (411 aa)
ENSVVUP00000024568annotation not available (203 aa)
NUP210Nuclear pore membrane glycoprotein 210. (1842 aa)
ENSVVUP00000025427annotation not available (98 aa)
NCBP1Nuclear cap-binding protein subunit 1 isoform X1. (790 aa)
RANBP2E3 SUMO-protein ligase RanBP2 isoform X4. (3265 aa)
NUP93Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (819 aa)
EIF4E-2Eukaryotic translation initiation factor 4E isoform X1; Belongs to the eukaryotic initiation factor 4E family. (222 aa)
NUP160Nuclear pore complex protein Nup160. (1402 aa)
SHLD1Shieldin complex subunit 1. (278 aa)
SEC13Protein SEC13 homolog; Belongs to the WD repeat SEC13 family. (308 aa)
NUP54Nucleoporin p54 isoform X2. (508 aa)
CPSF2Cleavage and polyadenylation specificity factor subunit 2. (782 aa)
LOC112935781Nuclear envelope pore membrane protein POM 121C-like. (1057 aa)
FIP1L1pre-mRNA 3'-end-processing factor FIP1 isoform X1. (603 aa)
NUP98Nuclear pore complex protein Nup98-Nup96 isoform X2. (1800 aa)
NDC1Nucleoporin NDC1. (816 aa)
NUP188Nucleoporin NUP188 homolog isoform X1. (1764 aa)
SRRM1LOW QUALITY PROTEIN: serine/arginine repetitive matrix protein 1. (903 aa)
NUP88Nuclear pore complex protein Nup88. (867 aa)
NUP214LOW QUALITY PROTEIN: nuclear pore complex protein Nup214. (2088 aa)
AAASAladin isoform X1. (546 aa)
NUP50Nuclear pore complex protein Nup50. (467 aa)
NUP210LNuclear pore membrane glycoprotein 210-like isoform X1. (1888 aa)
NXF1Nuclear RNA export factor 1. (704 aa)
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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