STRINGSTRING
LOC112920484 LOC112920484 NR5A2 NR5A2 POLR2L POLR2L LOC112920488 LOC112920488 LOC112910323-2 LOC112910323-2 ENSVVUP00000000332 ENSVVUP00000000332 MYB MYB KAT2B KAT2B LOC112910316 LOC112910316 LOC112910361 LOC112910361 LOC112910323 LOC112910323 ENSVVUP00000001078 ENSVVUP00000001078 ENSVVUP00000001123 ENSVVUP00000001123 GREB1 GREB1 MED1 MED1 GTF2A2 GTF2A2 LOC112923559 LOC112923559 LOC112912793 LOC112912793 ENSVVUP00000004499 ENSVVUP00000004499 GREB1L GREB1L FOSB FOSB H2AJ H2AJ LOC112917557 LOC112917557 KANK1 KANK1 ZC3H12D ZC3H12D GTF2A1L GTF2A1L POLR2B POLR2B LOC112923719 LOC112923719 DDX5 DDX5 ESR1 ESR1 GATA3 GATA3 LOC112922136 LOC112922136 EP300 EP300 TBP TBP TNRC6B TNRC6B LOC112908299 LOC112908299 H2BC18 H2BC18 H3C14 H3C14 ENSVVUP00000010358 ENSVVUP00000010358 LOC112907712 LOC112907712 H2BC21 H2BC21 H2AC20 H2AC20 ENSVVUP00000010438 ENSVVUP00000010438 H2AZ1 H2AZ1 ENSVVUP00000010843 ENSVVUP00000010843 ENSVVUP00000011641 ENSVVUP00000011641 POLR2D POLR2D KDM4B KDM4B ERBB4 ERBB4 CXXC5 CXXC5 ENSVVUP00000014575 ENSVVUP00000014575 CBFB CBFB LOC112911708 LOC112911708 ZFP42 ZFP42 POLR2H POLR2H POLR2K POLR2K CDK9 CDK9 POLR2I POLR2I ENSVVUP00000018652 ENSVVUP00000018652 EBAG9 EBAG9 NCOA1 NCOA1 LOC112920802 LOC112920802 ENSVVUP00000020247 ENSVVUP00000020247 TLE3 TLE3 USF2 USF2 TRPS1 TRPS1 HDAC1 HDAC1 ZC3H12C ZC3H12C C11orf88 C11orf88 USF1 USF1 CREBBP CREBBP TFF3 TFF3 NCOA3 NCOA3 GTF2A1 GTF2A1 CARM1 CARM1 KANK2 KANK2 PRMT8 PRMT8 NCOA2 NCOA2 TBPL1 TBPL1 LOC112923335 LOC112923335 CCNT1 CCNT1 CHD1 CHD1 ENSVVUP00000027538 ENSVVUP00000027538 ENSVVUP00000027565 ENSVVUP00000027565 ENSVVUP00000027572 ENSVVUP00000027572 LOC112910324 LOC112910324 H2BC11 H2BC11 FOXA1 FOXA1 ENSVVUP00000028484 ENSVVUP00000028484 ENSVVUP00000029221 ENSVVUP00000029221 ENSVVUP00000029866 ENSVVUP00000029866 PRMT1 PRMT1 ZC3H12B ZC3H12B ZNF217 ZNF217 POLR2E POLR2E ZC3H12A ZC3H12A POLR2C POLR2C H2AX H2AX POLR2J POLR2J LOC112935767 LOC112935767 LOC112917707 LOC112917707 NRIP1 NRIP1 POLR2F POLR2F ENSVVUP00000034126 ENSVVUP00000034126 KANK3 KANK3 LOC112910316-2 LOC112910316-2 ENSVVUP00000035131 ENSVVUP00000035131 ENSVVUP00000035151 ENSVVUP00000035151 LOC112920483 LOC112920483 H2BC3 H2BC3 ENSVVUP00000035209 ENSVVUP00000035209 CITED1 CITED1 KANK4 KANK4 GTF2F1 GTF2F1 KAT5 KAT5 LOC112934396 LOC112934396 POLR2A POLR2A SP1 SP1 YY1 YY1 GTF2F2 GTF2F2 HSP90AA1 HSP90AA1 LOC112929760 LOC112929760 TBPL2 TBPL2 POLR2G POLR2G LOC112911986 LOC112911986 LOC112911984 LOC112911984
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC112920484Histone H3.1-like; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (145 aa)
NR5A2Nuclear receptor subfamily 5 group A member 2 isoform X1. (519 aa)
POLR2LDNA-directed RNA polymerases I, II, and III subunit RPABC5. (67 aa)
LOC112920488Histone H2B; Belongs to the histone H2B family. (127 aa)
LOC112910323-2Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
ENSVVUP00000000332annotation not available (126 aa)
MYBTranscriptional activator Myb. (743 aa)
KAT2BHistone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily. (799 aa)
LOC112910316Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC112910361LOW QUALITY PROTEIN: uncharacterized protein LOC112910361; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (288 aa)
LOC112910323Histone H4. (103 aa)
ENSVVUP00000001078annotation not available (132 aa)
ENSVVUP00000001123annotation not available (140 aa)
GREB1Protein GREB1. (2011 aa)
MED1Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1583 aa)
GTF2A2Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (137 aa)
LOC112923559Histone H3; Belongs to the histone H3 family. (136 aa)
LOC112912793DNA-directed RNA polymerase II subunit RPB3-like. (153 aa)
ENSVVUP00000004499annotation not available (1082 aa)
GREB1LGREB1-like protein. (2003 aa)
FOSBProtein fosB isoform X1. (418 aa)
H2AJHistone H2A; Belongs to the histone H2A family. (129 aa)
LOC112917557Histone H4. (103 aa)
KANK1KN motif and ankyrin repeat domain-containing protein 1 isoform X1. (1347 aa)
ZC3H12DProbable ribonuclease ZC3H12D. (157 aa)
GTF2A1LTFIIA-alpha and beta-like factor isoform X1. (476 aa)
POLR2BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
LOC112923719Late histone H2B.L4-like; Belongs to the histone H2B family. (122 aa)
DDX5Probable ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family. (614 aa)
ESR1Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues. (595 aa)
GATA3Trans-acting T-cell-specific transcription factor GATA-3. (444 aa)
LOC112922136Histone-arginine methyltransferase CARM1-like; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (457 aa)
EP300Histone acetyltransferase p300 isoform X1. (2430 aa)
TBPTATA-box-binding protein isoform X1. (324 aa)
TNRC6BTrinucleotide repeat-containing gene 6B protein isoform X2. (2190 aa)
LOC112908299Histone H2B subacrosomal variant-like; Belongs to the histone H2B family. (124 aa)
H2BC18Histone H2B; Belongs to the histone H2B family. (126 aa)
H3C14Histone H3; Belongs to the histone H3 family. (136 aa)
ENSVVUP00000010358annotation not available (181 aa)
LOC112907712Histone H4. (103 aa)
H2BC21Histone H2B; Belongs to the histone H2B family. (126 aa)
H2AC20Histone H2A; Belongs to the histone H2A family. (129 aa)
ENSVVUP00000010438Late histone H2B.L4-like. (67 aa)
H2AZ1Histone H2A; Belongs to the histone H2A family. (230 aa)
ENSVVUP00000010843annotation not available (67 aa)
ENSVVUP00000011641annotation not available (105 aa)
POLR2DDNA-directed RNA polymerase II subunit RPB4. (142 aa)
KDM4BLysine-specific demethylase 4B isoform X2. (1215 aa)
ERBB4Receptor protein-tyrosine kinase. (1249 aa)
CXXC5CXXC-type zinc finger protein 5. (317 aa)
ENSVVUP00000014575annotation not available (108 aa)
CBFBCore-binding factor subunit beta isoform X2. (365 aa)
LOC112911708Histone H2A.V. (237 aa)
ZFP42Zinc finger protein 42 homolog. (254 aa)
POLR2HDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
POLR2KDNA-directed RNA polymerases I, II, and III subunit RPABC4. (59 aa)
CDK9Cyclin-dependent kinase 9; Belongs to the protein kinase superfamily. (372 aa)
POLR2IDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
ENSVVUP00000018652annotation not available (89 aa)
EBAG9Receptor-binding cancer antigen expressed on SiSo cells isoform X1. (289 aa)
NCOA1Nuclear receptor coactivator. (1483 aa)
LOC112920802Histone H3.3. (136 aa)
ENSVVUP00000020247annotation not available (119 aa)
TLE3Transducin-like enhancer protein 3 isoform X6. (713 aa)
USF2Upstream stimulatory factor 2. (370 aa)
TRPS1Zinc finger transcription factor Trps1 isoform X2. (1296 aa)
HDAC1Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (489 aa)
ZC3H12CProbable ribonuclease ZC3H12C. (326 aa)
C11orf88UPF0722 protein C11orf88 homolog. (168 aa)
USF1Upstream stimulatory factor 1 isoform X1. (310 aa)
CREBBPCREB-binding protein isoform X1. (2442 aa)
TFF3Trefoil factor 3. (102 aa)
NCOA3Nuclear receptor coactivator. (1440 aa)
GTF2A1Transcription initiation factor IIA subunit 1. (350 aa)
CARM1Histone-arginine methyltransferase CARM1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (778 aa)
KANK2KN motif and ankyrin repeat domain-containing protein 2 isoform X1. (885 aa)
PRMT8Protein arginine N-methyltransferase 8 isoform X1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (394 aa)
NCOA2Nuclear receptor coactivator. (1485 aa)
TBPL1TATA box-binding protein-like protein 1. (186 aa)
LOC112923335Histone H3; Belongs to the histone H3 family. (136 aa)
CCNT1cyclin-T1; Belongs to the cyclin family. (1037 aa)
CHD1chromodomain-helicase-DNA-binding protein 1 isoform X2. (1708 aa)
ENSVVUP00000027538annotation not available (149 aa)
ENSVVUP00000027565annotation not available (103 aa)
ENSVVUP00000027572annotation not available (103 aa)
LOC112910324Histone H4. (103 aa)
H2BC11Histone H2B; Belongs to the histone H2B family. (126 aa)
FOXA1LOW QUALITY PROTEIN: hepatocyte nuclear factor 3-alpha. (440 aa)
ENSVVUP00000028484annotation not available (162 aa)
ENSVVUP00000029221annotation not available (69 aa)
ENSVVUP00000029866annotation not available (67 aa)
PRMT1Protein arginine N-methyltransferase 1 isoform X1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (371 aa)
ZC3H12BProbable ribonuclease ZC3H12B. (836 aa)
ZNF217Zinc finger protein 217. (980 aa)
POLR2EDNA-directed RNA polymerases I, II, and III subunit RPABC1. (387 aa)
ZC3H12AEndoribonuclease ZC3H12A. (578 aa)
POLR2CDNA-directed RNA polymerase II subunit RPB3. (259 aa)
H2AXHistone H2A; Belongs to the histone H2A family. (143 aa)
POLR2JDNA-directed RNA polymerase II subunit RPB11-a. (134 aa)
LOC112935767Uroplakin-3b-like protein 1. (253 aa)
LOC112917707Prostaglandin E synthase 3. (160 aa)
NRIP1Nuclear receptor-interacting protein 1. (1118 aa)
POLR2FDNA-directed RNA polymerases I, II, and III subunit RPABC2. (169 aa)
ENSVVUP00000034126annotation not available (114 aa)
KANK3KN motif and ankyrin repeat domain-containing protein 3. (698 aa)
LOC112910316-2Histone H2B type 1. (126 aa)
ENSVVUP00000035131annotation not available (129 aa)
ENSVVUP00000035151annotation not available (103 aa)
LOC112920483Uncharacterized protein LOC112920483; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (140 aa)
H2BC3Histone H2B; Belongs to the histone H2B family. (126 aa)
ENSVVUP00000035209annotation not available (103 aa)
CITED1Cbp/p300-interacting transactivator 1 isoform X1. (221 aa)
KANK4KN motif and ankyrin repeat domain-containing protein 4. (1011 aa)
GTF2F1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (573 aa)
KAT5Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (555 aa)
LOC112934396Histone H2B; Belongs to the histone H2B family. (118 aa)
POLR2ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1942 aa)
SP1Transcription factor Sp1 isoform X1. (786 aa)
YY1Transcriptional repressor protein YY1. (408 aa)
GTF2F2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (249 aa)
HSP90AA1Heat shock protein HSP 90-alpha. (663 aa)
LOC112929760Transcription initiation factor IIA subunit 2-like. (74 aa)
TBPL2TATA box-binding protein-like protein 2. (257 aa)
POLR2GDNA-directed RNA polymerase II subunit RPB7 isoform X2. (172 aa)
LOC112911986Histone H2B; Belongs to the histone H2B family. (124 aa)
LOC112911984Histone H2B; Belongs to the histone H2B family. (126 aa)
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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