STRINGSTRING
RET RET TESPA1 TESPA1 VRK1 VRK1 IHH IHH MNS1 MNS1 MAPRE1-2 MAPRE1-2 CENPE CENPE SYCP1 SYCP1 MAPRE1 MAPRE1 KIF23 KIF23 DYNC1I2 DYNC1I2 CCT6B CCT6B
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RETProto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands. (1070 aa)
TESPA1Protein TESPA1 isoform X1. (519 aa)
VRK1Serine/threonine-protein kinase VRK1 isoform X2; Belongs to the protein kinase superfamily. (470 aa)
IHHHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (417 aa)
MNS1Meiosis-specific nuclear structural protein 1. (495 aa)
MAPRE1-2Microtubule-associated protein RP/EB family member 1. (126 aa)
CENPECentromere-associated protein E; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (2396 aa)
SYCP1Synaptonemal complex protein 1 isoform X1. (915 aa)
MAPRE1Microtubule-associated protein RP/EB family member 1. (195 aa)
KIF23Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (953 aa)
DYNC1I2Cytoplasmic dynein 1 intermediate chain 2 isoform X5. (632 aa)
CCT6BT-complex protein 1 subunit zeta-2. (582 aa)
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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