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WDR61 WDR61 LSM7 LSM7 CNOT9 CNOT9 TOB2 TOB2 CNOT8 CNOT8 PABPC4 PABPC4 EXOSC5 EXOSC5 MPHOSPH6 MPHOSPH6 CNOT4 CNOT4 PNLDC1 PNLDC1 EXOSC7 EXOSC7 PFKP-2 PFKP-2 LSM3 LSM3 CNOT7 CNOT7 LSM4 LSM4 CNOT3 CNOT3 CNOT2 CNOT2 LSM6 LSM6 PAN3 PAN3 EXOSC4 EXOSC4 PNPT1 PNPT1 ENO4 ENO4 ENO2 ENO2 PABPC4L PABPC4L TOB1 TOB1 PATL2 PATL2 BTG1 BTG1 XRN2 XRN2 EDC4 EDC4 PABPC1 PABPC1 PABPC5 PABPC5 LSM8 LSM8 EXOSC9 EXOSC9 DIS3L DIS3L BTG2 BTG2 PFKM-2 PFKM-2 BTG4 BTG4 LOC112911805 LOC112911805 PATL1 PATL1 TENT4A TENT4A DIS3 DIS3 TENT4B TENT4B EDC3 EDC3 PARN PARN EXOSC3 EXOSC3 ZCCHC7 ZCCHC7 DCPS DCPS LSM1 LSM1 HSPA9 HSPA9 DCP1B DCP1B LSM5 LSM5 MTREX MTREX PAN2 PAN2 TTC37 TTC37 CNOT10 CNOT10 EXOSC1 EXOSC1 SKIV2L SKIV2L DCP1A DCP1A BTG3 BTG3 PFKL PFKL DDX6 DDX6 DHX36 DHX36 CNOT6L CNOT6L HSPD1 HSPD1 DCP2 DCP2 XRN1 XRN1 ENO1 ENO1 EXOSC8 EXOSC8 CNOT6 CNOT6 CNOT1 CNOT1 EXOSC10 EXOSC10 ENO3 ENO3 C1D C1D EXOSC2 EXOSC2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
WDR61WD repeat-containing protein 61. (289 aa)
LSM7U6 snRNA-associated Sm-like protein LSm7. (109 aa)
CNOT9CCR4-NOT transcription complex subunit 9. (309 aa)
TOB2Protein Tob2. (338 aa)
CNOT8CCR4-NOT transcription complex subunit 8. (292 aa)
PABPC4Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (660 aa)
EXOSC5Exosome complex component RRP46. (235 aa)
MPHOSPH6M-phase phosphoprotein 6 isoform X1. (161 aa)
CNOT4CCR4-NOT transcription complex subunit 4 isoform X1. (713 aa)
PNLDC1poly(A)-specific ribonuclease PNLDC1 isoform X1. (594 aa)
EXOSC7Exosome complex component RRP42 isoform X1. (291 aa)
PFKP-2ATP-dependent 6-phosphofructokinase, platelet type. (100 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (112 aa)
CNOT7CCR4-NOT transcription complex subunit 7. (285 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (195 aa)
CNOT3CCR4-NOT transcription complex subunit 3. (799 aa)
CNOT2CCR4-NOT transcription complex subunit 2 isoform X3. (551 aa)
LSM6U6 snRNA-associated Sm-like protein LSm6. (117 aa)
PAN3PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] (955 aa)
EXOSC4Exosome complex component RRP41. (245 aa)
PNPT1Polyribonucleotide nucleotidyltransferase 1, mitochondrial. (784 aa)
ENO4Enolase 4 isoform X1. (627 aa)
ENO2Gamma-enolase. (435 aa)
PABPC4LLOW QUALITY PROTEIN: polyadenylate-binding protein 4-like. (219 aa)
TOB1Protein Tob1. (345 aa)
PATL2Protein PAT1 homolog 2. (537 aa)
BTG1Protein BTG1. (96 aa)
XRN25'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (950 aa)
EDC4Enhancer of mRNA-decapping protein 4. (1400 aa)
PABPC1Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (565 aa)
PABPC5Polyadenylate-binding protein 5. (382 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (91 aa)
EXOSC9Exosome complex component RRP45. (440 aa)
DIS3LDIS3-like exonuclease 1 isoform X1; Belongs to the RNR ribonuclease family. (1079 aa)
BTG2Protein BTG2. (162 aa)
PFKM-2ATP-dependent 6-phosphofructokinase, muscle type. (104 aa)
BTG4Protein BTG4. (230 aa)
LOC112911805Polyadenylate-binding protein 1-like 2. (206 aa)
PATL1Protein PAT1 homolog 1. (790 aa)
TENT4ANon-canonical poly(A) RNA polymerase PAPD7 isoform X1. (542 aa)
DIS3Exosome complex exonuclease RRP44 isoform X1; Belongs to the RNR ribonuclease family. (958 aa)
TENT4BLOW QUALITY PROTEIN: non-canonical poly(A) RNA polymerase PAPD5. (663 aa)
EDC3Enhancer of mRNA-decapping protein 3 isoform X2. (508 aa)
PARNpoly(A)-specific ribonuclease PARN. (638 aa)
EXOSC3Exosome complex component RRP40 isoform X1. (275 aa)
ZCCHC7Zinc finger CCHC domain-containing protein 7. (457 aa)
DCPSm7GpppX diphosphatase. (388 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Plays a role in the degradation of histone mRNAs, the only eukaryotic mRNAs that are not polyadenylated. Probably also part of an LSm subunits-containing complex involved in the general process of mRNA degradation. (133 aa)
HSPA9Stress-70 protein, mitochondrial; Belongs to the heat shock protein 70 family. (679 aa)
DCP1BmRNA-decapping enzyme 1B isoform X1. (612 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (91 aa)
MTREXExosome RNA helicase MTR4. (1042 aa)
PAN2PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...] (1198 aa)
TTC37Tetratricopeptide repeat protein 37. (1564 aa)
CNOT10CCR4-NOT transcription complex subunit 10 isoform X1. (803 aa)
EXOSC1Exosome complex component CSL4 isoform X1. (309 aa)
SKIV2LHelicase SKI2W. (1246 aa)
DCP1AmRNA-decapping enzyme 1A. (580 aa)
BTG3Protein BTG3. (282 aa)
PFKLATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily. (789 aa)
DDX6Probable ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family. (483 aa)
DHX36ATP-dependent RNA helicase DHX36. (1006 aa)
CNOT6LCCR4-NOT transcription complex subunit 6-like. (608 aa)
HSPD160 kDa heat shock protein, mitochondrial; Belongs to the chaperonin (HSP60) family. (573 aa)
DCP2m7GpppN-mRNA hydrolase. (422 aa)
XRN15'-3' exoribonuclease 1 isoform X2. (1731 aa)
ENO1Alpha-enolase. (615 aa)
EXOSC8Exosome complex component RRP43. (463 aa)
CNOT6CCR4-NOT transcription complex subunit 6 isoform X1. (557 aa)
CNOT1CCR4-NOT transcription complex subunit 1 isoform X1. (2376 aa)
EXOSC10Exosome component 10. (803 aa)
ENO3Beta-enolase isoform X2. (434 aa)
C1DNuclear nucleic acid-binding protein C1D. (160 aa)
EXOSC2Exosome complex component RRP4. (293 aa)
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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