11 items (Ursus americanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TRA2B	Transformer 2 beta homolog. (241 aa)
	SRSF6	Serine and arginine rich splicing factor 6. (344 aa)
	SRSF4	Serine and arginine rich splicing factor 4. (497 aa)
	SRPK1	SRSF protein kinase 1. (698 aa)
	ENSUAMP00000012147	Uncharacterized protein. (248 aa)
	ENSUAMP00000014066	RRM domain-containing protein. (273 aa)
	ENSUAMP00000014226	RRM domain-containing protein. (148 aa)
	SRSF2	RRM domain-containing protein. (221 aa)
	SRSF9	Serine and arginine rich splicing factor 9. (221 aa)
	SRSF3	Serine and arginine rich splicing factor 3. (156 aa)
	ENSUAMP00000032859	Uncharacterized protein. (137 aa)

Your Current Organism:

Ursus americanus

NCBI taxonomy Id: 9643
Other names: American black bear, Euarctos americanus, U. americanus

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSUAMP00000012147	ENSUAMP00000014066	ENSUAMP00000012147	ENSUAMP00000014066	Uncharacterized protein.	RRM domain-containing protein.	0.987
ENSUAMP00000012147	ENSUAMP00000014226	ENSUAMP00000012147	ENSUAMP00000014226	Uncharacterized protein.	RRM domain-containing protein.	0.981
ENSUAMP00000012147	ENSUAMP00000032859	ENSUAMP00000012147	ENSUAMP00000032859	Uncharacterized protein.	Uncharacterized protein.	0.981
ENSUAMP00000012147	SRPK1	ENSUAMP00000012147	ENSUAMP00000011726	Uncharacterized protein.	SRSF protein kinase 1.	0.983
ENSUAMP00000012147	SRSF2	ENSUAMP00000012147	ENSUAMP00000016880	Uncharacterized protein.	RRM domain-containing protein.	0.989
ENSUAMP00000012147	SRSF3	ENSUAMP00000012147	ENSUAMP00000023020	Uncharacterized protein.	Serine and arginine rich splicing factor 3.	0.987
ENSUAMP00000012147	SRSF4	ENSUAMP00000012147	ENSUAMP00000006976	Uncharacterized protein.	Serine and arginine rich splicing factor 4.	0.922
ENSUAMP00000012147	SRSF6	ENSUAMP00000012147	ENSUAMP00000003862	Uncharacterized protein.	Serine and arginine rich splicing factor 6.	0.928
ENSUAMP00000012147	SRSF9	ENSUAMP00000012147	ENSUAMP00000019619	Uncharacterized protein.	Serine and arginine rich splicing factor 9.	0.974
ENSUAMP00000012147	TRA2B	ENSUAMP00000012147	ENSUAMP00000000688	Uncharacterized protein.	Transformer 2 beta homolog.	0.993
ENSUAMP00000014066	ENSUAMP00000012147	ENSUAMP00000014066	ENSUAMP00000012147	RRM domain-containing protein.	Uncharacterized protein.	0.987
ENSUAMP00000014066	ENSUAMP00000014226	ENSUAMP00000014066	ENSUAMP00000014226	RRM domain-containing protein.	RRM domain-containing protein.	0.851
ENSUAMP00000014066	ENSUAMP00000032859	ENSUAMP00000014066	ENSUAMP00000032859	RRM domain-containing protein.	Uncharacterized protein.	0.851
ENSUAMP00000014066	SRSF2	ENSUAMP00000014066	ENSUAMP00000016880	RRM domain-containing protein.	RRM domain-containing protein.	0.566
ENSUAMP00000014066	SRSF3	ENSUAMP00000014066	ENSUAMP00000023020	RRM domain-containing protein.	Serine and arginine rich splicing factor 3.	0.914
ENSUAMP00000014066	SRSF4	ENSUAMP00000014066	ENSUAMP00000006976	RRM domain-containing protein.	Serine and arginine rich splicing factor 4.	0.928
ENSUAMP00000014066	SRSF6	ENSUAMP00000014066	ENSUAMP00000003862	RRM domain-containing protein.	Serine and arginine rich splicing factor 6.	0.930
ENSUAMP00000014066	SRSF9	ENSUAMP00000014066	ENSUAMP00000019619	RRM domain-containing protein.	Serine and arginine rich splicing factor 9.	0.935
ENSUAMP00000014066	TRA2B	ENSUAMP00000014066	ENSUAMP00000000688	RRM domain-containing protein.	Transformer 2 beta homolog.	0.951
ENSUAMP00000014226	ENSUAMP00000012147	ENSUAMP00000014226	ENSUAMP00000012147	RRM domain-containing protein.	Uncharacterized protein.	0.981