STRINGSTRING
KHDRBS3 KHDRBS3 TRA2B TRA2B CELF1 CELF1 LARP7 LARP7 ENSUAMP00000001281 ENSUAMP00000001281 DYRK1A DYRK1A ENSUAMP00000002331 ENSUAMP00000002331 ENSUAMP00000002905 ENSUAMP00000002905 ENSUAMP00000002924 ENSUAMP00000002924 ENSUAMP00000003103 ENSUAMP00000003103 FXR2 FXR2 SRSF6 SRSF6 ENSUAMP00000004593 ENSUAMP00000004593 RBFOX3 RBFOX3 NCBP1 NCBP1 CELF4 CELF4 PTBP1 PTBP1 NCL NCL SRSF4 SRSF4 FXR1 FXR1 DDX17 DDX17 PRR3 PRR3 HMX2 HMX2 RBM25 RBM25 RAVER2 RAVER2 RBM23 RBM23 MBNL2 MBNL2 CELF2 CELF2 KHDRBS1 KHDRBS1 WTAP WTAP YTHDC1 YTHDC1 ENSUAMP00000026293 ENSUAMP00000026293 RBM39 RBM39 ZC3H10 ZC3H10 RBFOX2 RBFOX2 PRPF19 PRPF19 ENSUAMP00000014226 ENSUAMP00000014226 MBNL3 MBNL3 ENSUAMP00000014628 ENSUAMP00000014628 MYOD1 MYOD1 EIF4A3 EIF4A3 NUP98 NUP98 SLC39A5 SLC39A5 ENSUAMP00000035832 ENSUAMP00000035832 CELF5 CELF5 HNRNPK HNRNPK RBM11 RBM11 RBM10 RBM10 RBM24 RBM24 TIA1 TIA1 NOVA1 NOVA1 ENSUAMP00000033778 ENSUAMP00000033778 ENSUAMP00000033775 ENSUAMP00000033775 SMU1 SMU1 ENSUAMP00000033513 ENSUAMP00000033513 ENSUAMP00000032859 ENSUAMP00000032859 PUF60 PUF60 RBFOX1 RBFOX1 DDX5 DDX5 SF3B4 SF3B4 SNW1 SNW1 HNRNPU HNRNPU ZBTB7A ZBTB7A RBM8A RBM8A ENSUAMP00000028056 ENSUAMP00000028056 PCBP4 PCBP4 RBM42 RBM42 ENSUAMP00000014644 ENSUAMP00000014644 SF1 SF1 ENSUAMP00000014932 ENSUAMP00000014932 ENSUAMP00000015168 ENSUAMP00000015168 RBMX RBMX JMJD6 JMJD6 ENSUAMP00000017321 ENSUAMP00000017321 CIRBP CIRBP DAZAP1 DAZAP1 RBM4 RBM4 SON SON CEP57L1 CEP57L1 NOVA2 NOVA2 THRAP3 THRAP3 ENSUAMP00000020419 ENSUAMP00000020419 RBM15 RBM15 SRSF3 SRSF3 FMR1 FMR1 MBNL1 MBNL1 ENSUAMP00000024181 ENSUAMP00000024181 ENSUAMP00000024434 ENSUAMP00000024434 NSRP1 NSRP1 CELF3 CELF3 RBM38 RBM38 U2AF2 U2AF2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
KHDRBS3KH RNA binding domain containing, signal transduction associated 3. (203 aa)
TRA2BTransformer 2 beta homolog. (241 aa)
CELF1CUGBP Elav-like family member 1. (463 aa)
LARP7La ribonucleoprotein domain family member 7. (581 aa)
ENSUAMP00000001281RRM domain-containing protein. (72 aa)
DYRK1ADual specificity tyrosine phosphorylation regulated kinase 1A. (754 aa)
ENSUAMP00000002331RRM domain-containing protein. (80 aa)
ENSUAMP00000002905RRM domain-containing protein. (71 aa)
ENSUAMP00000002924Uncharacterized protein. (335 aa)
ENSUAMP00000003103Uncharacterized protein. (89 aa)
FXR2FMR1 autosomal homolog 2. (673 aa)
SRSF6Serine and arginine rich splicing factor 6. (344 aa)
ENSUAMP00000004593Uncharacterized protein. (64 aa)
RBFOX3RNA binding fox-1 homolog 3. (312 aa)
NCBP1Nuclear cap binding protein subunit 1. (790 aa)
CELF4CUGBP Elav-like family member 4. (413 aa)
PTBP1Polypyrimidine tract binding protein 1. (527 aa)
NCLNucleolin. (647 aa)
SRSF4Serine and arginine rich splicing factor 4. (497 aa)
FXR1FMR1 autosomal homolog 1. (536 aa)
DDX17DEAD-box helicase 17; Belongs to the DEAD box helicase family. (715 aa)
PRR3Proline rich 3. (188 aa)
HMX2H6 family homeobox 2. (273 aa)
RBM25RNA binding motif protein 25. (775 aa)
RAVER2Ribonucleoprotein, PTB binding 2. (662 aa)
RBM23RNA binding motif protein 23. (446 aa)
MBNL2Muscleblind like splicing regulator 2. (385 aa)
CELF2CUGBP Elav-like family member 2. (299 aa)
KHDRBS1KH RNA binding domain containing, signal transduction associated 1. (443 aa)
WTAPWT1 associated protein. (396 aa)
YTHDC1YTH domain containing 1. (678 aa)
ENSUAMP00000026293Uncharacterized protein. (758 aa)
RBM39RNA binding motif protein 39. (530 aa)
ZC3H10Zinc finger CCCH-type containing 10. (459 aa)
RBFOX2RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events. (384 aa)
PRPF19Pre-mRNA processing factor 19. (504 aa)
ENSUAMP00000014226RRM domain-containing protein. (148 aa)
MBNL3Muscleblind like splicing regulator 3. (349 aa)
ENSUAMP00000014628PWI domain-containing protein. (90 aa)
MYOD1Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation. (319 aa)
EIF4A3Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. (411 aa)
NUP98Nucleoporin 98. (1157 aa)
SLC39A5Solute carrier family 39 member 5. (472 aa)
ENSUAMP00000035832Qua1 domain-containing protein. (74 aa)
CELF5CUGBP Elav-like family member 5. (472 aa)
HNRNPKHeterogeneous nuclear ribonucleoprotein K. (464 aa)
RBM11RNA binding motif protein 11. (238 aa)
RBM10RNA binding motif protein 10. (955 aa)
RBM24RNA binding motif protein 24. (182 aa)
TIA1TIA1 cytotoxic granule associated RNA binding protein. (386 aa)
NOVA1NOVA alternative splicing regulator 1. (507 aa)
ENSUAMP00000033778RRM domain-containing protein. (122 aa)
ENSUAMP00000033775Uncharacterized protein. (178 aa)
SMU1SMU1 DNA replication regulator and spliceosomal factor. (513 aa)
ENSUAMP00000033513RRM domain-containing protein. (128 aa)
ENSUAMP00000032859Uncharacterized protein. (137 aa)
PUF60Poly(U) binding splicing factor 60. (558 aa)
RBFOX1RNA binding protein fox-1 homolog 1; RNA-binding protein that regulates alternative splicing events. (430 aa)
DDX5DEAD-box helicase 5; Belongs to the DEAD box helicase family. (614 aa)
SF3B4Splicing factor 3b subunit 4. (424 aa)
SNW1SNW domain containing 1. (511 aa)
HNRNPUHeterogeneous nuclear ribonucleoprotein U. (825 aa)
ZBTB7AZinc finger and BTB domain containing 7A. (529 aa)
RBM8ARNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (174 aa)
ENSUAMP00000028056SPOC domain-containing protein. (210 aa)
PCBP4Poly(rC) binding protein 4. (386 aa)
RBM42RNA binding motif protein 42. (477 aa)
ENSUAMP00000014644RBM1CTR domain-containing protein. (262 aa)
SF1Splicing factor 1. (515 aa)
ENSUAMP00000014932Uncharacterized protein. (113 aa)
ENSUAMP00000015168Uncharacterized protein. (119 aa)
RBMXRRM domain-containing protein. (391 aa)
JMJD6Jumonji domain containing 6, arginine demethylase and lysine hydroxylase. (403 aa)
ENSUAMP00000017321SRRM_C domain-containing protein. (382 aa)
CIRBPCold inducible RNA binding protein. (314 aa)
DAZAP1DAZ associated protein 1. (428 aa)
RBM4RNA binding motif protein 4. (365 aa)
SONSON DNA binding protein. (2393 aa)
CEP57L1Centrosomal protein 57 like 1. (477 aa)
NOVA2NOVA alternative splicing regulator 2. (448 aa)
THRAP3Thyroid hormone receptor associated protein 3. (958 aa)
ENSUAMP00000020419Uncharacterized protein. (490 aa)
RBM15RNA binding motif protein 15. (958 aa)
SRSF3Serine and arginine rich splicing factor 3. (156 aa)
FMR1Fragile X mental retardation 1. (621 aa)
MBNL1Muscleblind like splicing regulator 1. (324 aa)
ENSUAMP00000024181SF1-HH domain-containing protein. (73 aa)
ENSUAMP00000024434RRM domain-containing protein. (263 aa)
NSRP1Nuclear speckle splicing regulatory protein 1. (502 aa)
CELF3CUGBP Elav-like family member 3. (466 aa)
RBM38RNA binding motif protein 38. (239 aa)
U2AF2U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (455 aa)
Your Current Organism:
Ursus americanus
NCBI taxonomy Id: 9643
Other names: American black bear, Euarctos americanus, U. americanus
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