STRINGSTRING
SNAI1 SNAI1 MSX1 MSX1 HAND2 HAND2 HOXA5 HOXA5 MATN1 MATN1 HAND1 HAND1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SNAI1Snail family transcriptional repressor 1. (259 aa)
MSX1Msh homeobox 1. (303 aa)
HAND2Heart and neural crest derivatives expressed 2. (217 aa)
HOXA5Homeobox A5. (381 aa)
MATN1Matrilin 1. (497 aa)
HAND1Heart and neural crest derivatives expressed 1. (218 aa)
Your Current Organism:
Ursus americanus
NCBI taxonomy Id: 9643
Other names: American black bear, Euarctos americanus, U. americanus
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