(18 nodes) Homeobox protein, antennapedia type, conserved site network (Ursus americanus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HOXB6	Homeobox B6. (224 aa)
	ENSUAMP00000001158	Homeobox domain-containing protein. (102 aa)
	ENSUAMP00000001190	Homeobox domain-containing protein. (235 aa)
	HOXB2	Homeobox B2. (346 aa)
	HOXA2	Homeobox A2. (374 aa)
	HOXA3	Homeobox A3. (419 aa)
	HOXA4	Homeobox A4. (187 aa)
	HOXA5	Homeobox A5. (381 aa)
	HOXA6	Homeobox A6. (233 aa)
	HOXA7	Homeobox A7. (235 aa)
	HOXB4	Homeobox B4. (240 aa)
	HOXB5	Homeobox B5. (269 aa)
	HOXB7	Homeobox B7. (217 aa)
	HOXB8	Homeobox B8. (243 aa)
	HOXD8	Homeobox D8. (297 aa)
	HOXD3	Homeobox D3. (432 aa)
	ENSUAMP00000034624	Homeobox domain-containing protein. (222 aa)
	HOXC4	Homeobox C4. (264 aa)

Your Current Organism:

Ursus americanus

NCBI taxonomy Id: 9643
Other names: American black bear, Euarctos americanus, U. americanus

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSUAMP00000001158	HOXB6	ENSUAMP00000001158	ENSUAMP00000028330	Homeobox domain-containing protein.	Homeobox B6.	0.509
ENSUAMP00000001158	HOXB7	ENSUAMP00000001158	ENSUAMP00000028332	Homeobox domain-containing protein.	Homeobox B7.	0.496
ENSUAMP00000001190	ENSUAMP00000034624	ENSUAMP00000001190	ENSUAMP00000034624	Homeobox domain-containing protein.	Homeobox domain-containing protein.	0.736
ENSUAMP00000001190	HOXA6	ENSUAMP00000001190	ENSUAMP00000017943	Homeobox domain-containing protein.	Homeobox A6.	0.540
ENSUAMP00000001190	HOXA7	ENSUAMP00000001190	ENSUAMP00000017945	Homeobox domain-containing protein.	Homeobox A7.	0.634
ENSUAMP00000001190	HOXB4	ENSUAMP00000001190	ENSUAMP00000028328	Homeobox domain-containing protein.	Homeobox B4.	0.575
ENSUAMP00000001190	HOXB5	ENSUAMP00000001190	ENSUAMP00000028329	Homeobox domain-containing protein.	Homeobox B5.	0.572
ENSUAMP00000001190	HOXB6	ENSUAMP00000001190	ENSUAMP00000028330	Homeobox domain-containing protein.	Homeobox B6.	0.632
ENSUAMP00000001190	HOXB7	ENSUAMP00000001190	ENSUAMP00000028332	Homeobox domain-containing protein.	Homeobox B7.	0.731
ENSUAMP00000001190	HOXC4	ENSUAMP00000001190	ENSUAMP00000034626	Homeobox domain-containing protein.	Homeobox C4.	0.802
ENSUAMP00000034624	ENSUAMP00000001190	ENSUAMP00000034624	ENSUAMP00000001190	Homeobox domain-containing protein.	Homeobox domain-containing protein.	0.736
ENSUAMP00000034624	HOXA6	ENSUAMP00000034624	ENSUAMP00000017943	Homeobox domain-containing protein.	Homeobox A6.	0.531
ENSUAMP00000034624	HOXA7	ENSUAMP00000034624	ENSUAMP00000017945	Homeobox domain-containing protein.	Homeobox A7.	0.541
ENSUAMP00000034624	HOXB4	ENSUAMP00000034624	ENSUAMP00000028328	Homeobox domain-containing protein.	Homeobox B4.	0.539
ENSUAMP00000034624	HOXB5	ENSUAMP00000034624	ENSUAMP00000028329	Homeobox domain-containing protein.	Homeobox B5.	0.549
ENSUAMP00000034624	HOXB6	ENSUAMP00000034624	ENSUAMP00000028330	Homeobox domain-containing protein.	Homeobox B6.	0.557
ENSUAMP00000034624	HOXB7	ENSUAMP00000034624	ENSUAMP00000028332	Homeobox domain-containing protein.	Homeobox B7.	0.536
ENSUAMP00000034624	HOXC4	ENSUAMP00000034624	ENSUAMP00000034626	Homeobox domain-containing protein.	Homeobox C4.	0.798
HOXA2	HOXA3	ENSUAMP00000017939	ENSUAMP00000017940	Homeobox A2.	Homeobox A3.	0.741
HOXA2	HOXA4	ENSUAMP00000017939	ENSUAMP00000017941	Homeobox A2.	Homeobox A4.	0.473