STRINGSTRING
CCNT2 CCNT2 TMEM240 TMEM240 ENSUAMP00000001017 ENSUAMP00000001017 TBPL2 TBPL2 NABP1 NABP1 TAF9 TAF9 INTS13 INTS13 INTS6 INTS6 ZC3H6 ZC3H6 ZC3H8 ZC3H8 ENSUAMP00000003293 ENSUAMP00000003293 ENSUAMP00000003527 ENSUAMP00000003527 ENSUAMP00000003566 ENSUAMP00000003566 ENSUAMP00000003609 ENSUAMP00000003609 ENSUAMP00000003633 ENSUAMP00000003633 TBP TBP ENSUAMP00000004440 ENSUAMP00000004440 ENSUAMP00000004443 ENSUAMP00000004443 POLR2H POLR2H SUPT4H1 SUPT4H1 ENSUAMP00000005997 ENSUAMP00000005997 NCBP1 NCBP1 GTF2A2 GTF2A2 ENSUAMP00000006721 ENSUAMP00000006721 TMTC1 TMTC1 NCBP2L NCBP2L ZNF143 ZNF143 ENSUAMP00000009550 ENSUAMP00000009550 ENSUAMP00000009736 ENSUAMP00000009736 ENSUAMP00000010217 ENSUAMP00000010217 TAF6 TAF6 ENSUAMP00000011038 ENSUAMP00000011038 POLR2E POLR2E PCF11 PCF11 ENSUAMP00000011451 ENSUAMP00000011451 SNAPC4 SNAPC4 INTS10 INTS10 ENSUAMP00000013168 ENSUAMP00000013168 SP1 SP1 POLR2J POLR2J ENSUAMP00000014088 ENSUAMP00000014088 TAF5 TAF5 INTS7 INTS7 OCEL1 OCEL1 POU2F2 POU2F2 ENSUAMP00000015277 ENSUAMP00000015277 SNAPC3 SNAPC3 INTS11 INTS11 ENSUAMP00000017127 ENSUAMP00000017127 ENSUAMP00000017136 ENSUAMP00000017136 ENSUAMP00000017139 ENSUAMP00000017139 TAF11 TAF11 POLR2C POLR2C ZNF76 ZNF76 POLR2A POLR2A INTS12 INTS12 POU6F1 POU6F1 ELL ELL ENSUAMP00000020754 ENSUAMP00000020754 ENSUAMP00000020766 ENSUAMP00000020766 GTF2A1 GTF2A1 RPRD1A RPRD1A ENSUAMP00000021449 ENSUAMP00000021449 CCNK CCNK TMTC3 TMTC3 INTS1 INTS1 ENSUAMP00000023540 ENSUAMP00000023540 CDK7 CDK7 ICE2 ICE2 TMTC4 TMTC4 TBPL1 TBPL1 ENSUAMP00000025041 ENSUAMP00000025041 INTS14 INTS14 GTF2F2 GTF2F2 INTS3 INTS3 SUPT5H SUPT5H POLR2F POLR2F POLR2I POLR2I ENSUAMP00000026737 ENSUAMP00000026737 ENSUAMP00000026739 ENSUAMP00000026739 ENSUAMP00000027754 ENSUAMP00000027754 SNAPC2 SNAPC2 ENSUAMP00000028455 ENSUAMP00000028455 CDK9 CDK9 INTS2 INTS2 RPRD1B RPRD1B SNAPC5 SNAPC5 ENSUAMP00000030669 ENSUAMP00000030669 TAF13 TAF13 ENSUAMP00000031020 ENSUAMP00000031020 NCBP2 NCBP2 RPRD2 RPRD2 POLR2D POLR2D ENSUAMP00000032400 ENSUAMP00000032400 C11orf88 C11orf88 NABP2 NABP2 TAF8 TAF8 CCNQ CCNQ SRRT SRRT POU2F3 POU2F3 POLR2G POLR2G INTS5 INTS5 GTF2B GTF2B ENSUAMP00000034531 ENSUAMP00000034531 ELL3 ELL3 SNAPC1 SNAPC1 GTF2F1 GTF2F1 CCDC66 CCDC66 CCNT1 CCNT1 ENSUAMP00000035882 ENSUAMP00000035882 ENSUAMP00000000088 ENSUAMP00000000088 POU1F1 POU1F1 ENSUAMP00000000192 ENSUAMP00000000192
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CCNT2Cyclin T2; Belongs to the cyclin family. (733 aa)
TMEM240Transmembrane protein 240. (167 aa)
ENSUAMP00000001017Uncharacterized protein. (193 aa)
TBPL2TATA-box binding protein like 2. (344 aa)
NABP1Nucleic acid binding protein 1. (199 aa)
TAF9Uncharacterized protein. (265 aa)
INTS13Integrator complex subunit 13. (706 aa)
INTS6Integrator complex subunit 6. (774 aa)
ZC3H6Zinc finger CCCH-type containing 6. (1049 aa)
ZC3H8Zinc finger CCCH-type containing 8. (307 aa)
ENSUAMP00000003293INT_SG_DDX_CT_C domain-containing protein. (212 aa)
ENSUAMP00000003527Uncharacterized protein. (72 aa)
ENSUAMP00000003566Uncharacterized protein; Belongs to the RNA polymerase beta chain family. (942 aa)
ENSUAMP00000003609VWFA domain-containing protein. (166 aa)
ENSUAMP00000003633Uncharacterized protein. (444 aa)
TBPTATA-box binding protein. (324 aa)
ENSUAMP00000004440TPR_REGION domain-containing protein. (58 aa)
ENSUAMP00000004443DUF1736 domain-containing protein. (377 aa)
POLR2HDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
SUPT4H1Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. (117 aa)
ENSUAMP00000005997HTH TFE/IIEalpha-type domain-containing protein. (59 aa)
NCBP1Nuclear cap binding protein subunit 1. (790 aa)
GTF2A2General transcription factor IIA subunit 2. (71 aa)
ENSUAMP00000006721INT_SG_DDX_CT_C domain-containing protein. (187 aa)
TMTC1Transmembrane O-mannosyltransferase targeting cadherins 1. (519 aa)
NCBP2LNuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (162 aa)
ZNF143Zinc finger protein 143. (620 aa)
ENSUAMP00000009550Uncharacterized protein. (193 aa)
ENSUAMP00000009736Uncharacterized protein. (71 aa)
ENSUAMP00000010217Uncharacterized protein. (251 aa)
TAF6TATA-box binding protein associated factor 6. (685 aa)
ENSUAMP00000011038Uncharacterized protein. (629 aa)
POLR2ERNA polymerase II subunit E. (294 aa)
PCF11PCF11 cleavage and polyadenylation factor subunit. (1686 aa)
ENSUAMP00000011451Uncharacterized protein. (92 aa)
SNAPC4Small nuclear RNA activating complex polypeptide 4. (1432 aa)
INTS10Integrator complex subunit 10. (690 aa)
ENSUAMP00000013168Uncharacterized protein. (614 aa)
SP1Sp1 transcription factor. (780 aa)
POLR2JRNA polymerase II subunit J. (117 aa)
ENSUAMP00000014088Uncharacterized protein. (242 aa)
TAF5TATA-box binding protein associated factor 5. (462 aa)
INTS7Integrator complex subunit 7. (719 aa)
OCEL1Occludin/ELL domain containing 1. (352 aa)
POU2F2POU domain protein. (584 aa)
ENSUAMP00000015277Uncharacterized protein. (74 aa)
SNAPC3Small nuclear RNA activating complex polypeptide 3. (389 aa)
INTS11Integrator complex subunit 11. (600 aa)
ENSUAMP00000017127Occludin_ELL domain-containing protein. (311 aa)
ENSUAMP00000017136Uncharacterized protein. (180 aa)
ENSUAMP00000017139ELL domain-containing protein. (83 aa)
TAF11TATA-box binding protein associated factor 11. (211 aa)
POLR2CRNA polymerase II subunit C. (275 aa)
ZNF76Zinc finger protein 76. (570 aa)
POLR2ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1837 aa)
INTS12Integrator complex subunit 12. (462 aa)
POU6F1POU domain protein. (598 aa)
ELLElongation factor for RNA polymerase II. (633 aa)
ENSUAMP00000020754Uncharacterized protein. (105 aa)
ENSUAMP00000020766annotation not available (193 aa)
GTF2A1General transcription factor IIA subunit 1. (371 aa)
RPRD1ARegulation of nuclear pre-mRNA domain containing 1A. (270 aa)
ENSUAMP00000021449Uncharacterized protein. (194 aa)
CCNKCyclin K; Belongs to the cyclin family. (353 aa)
TMTC3Transmembrane O-mannosyltransferase targeting cadherins 3. (923 aa)
INTS1Integrator complex subunit 1. (2188 aa)
ENSUAMP00000023540Uncharacterized protein. (181 aa)
CDK7Cyclin dependent kinase 7. (266 aa)
ICE2Interactor of little elongation complex ELL subunit 2. (980 aa)
TMTC4Transmembrane O-mannosyltransferase targeting cadherins 4. (695 aa)
TBPL1TATA-box binding protein like 1. (186 aa)
ENSUAMP00000025041Protein kinase domain-containing protein. (80 aa)
INTS14Integrator complex subunit 14. (518 aa)
GTF2F2General transcription factor IIF subunit 2. (241 aa)
INTS3Integrator complex subunit 3. (1040 aa)
SUPT5HTranscription elongation factor SPT5. (1087 aa)
POLR2FRNA polymerase II subunit F. (127 aa)
POLR2IDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
ENSUAMP00000026737Uncharacterized protein. (291 aa)
ENSUAMP00000026739Uncharacterized protein. (379 aa)
ENSUAMP00000027754INT_SG_DDX_CT_C domain-containing protein. (201 aa)
SNAPC2Small nuclear RNA activating complex polypeptide 2. (329 aa)
ENSUAMP00000028455Uncharacterized protein. (71 aa)
CDK9Cyclin dependent kinase 9; Belongs to the protein kinase superfamily. (372 aa)
INTS2Integrator complex subunit 2. (844 aa)
RPRD1BRegulation of nuclear pre-mRNA domain containing 1B. (326 aa)
SNAPC5Small nuclear RNA activating complex polypeptide 5. (98 aa)
ENSUAMP00000030669Uncharacterized protein. (113 aa)
TAF13TATA-box binding protein associated factor 13. (142 aa)
ENSUAMP00000031020Uncharacterized protein. (175 aa)
NCBP2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (163 aa)
RPRD2Regulation of nuclear pre-mRNA domain containing 2. (1462 aa)
POLR2DRNA polymerase II subunit D. (132 aa)
ENSUAMP00000032400Uncharacterized protein. (67 aa)
C11orf88Chromosome 11 open reading frame 88. (155 aa)
NABP2Nucleic acid binding protein 2. (211 aa)
TAF8TATA-box binding protein associated factor 8. (300 aa)
CCNQCyclin Q; Belongs to the cyclin family. (250 aa)
SRRTSerrate, RNA effector molecule. (850 aa)
POU2F3POU domain protein. (436 aa)
POLR2GRNA polymerase II subunit G. (241 aa)
INTS5Integrator complex subunit 5. (1019 aa)
GTF2BGeneral transcription factor IIB. (316 aa)
ENSUAMP00000034531Uncharacterized protein. (173 aa)
ELL3Elongation factor for RNA polymerase II 3. (414 aa)
SNAPC1Small nuclear RNA activating complex polypeptide 1. (372 aa)
GTF2F1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (538 aa)
CCDC66Coiled-coil domain containing 66. (923 aa)
CCNT1Cyclin T1; Belongs to the cyclin family. (726 aa)
ENSUAMP00000035882Uncharacterized protein. (594 aa)
ENSUAMP00000000088VWFA domain-containing protein. (173 aa)
POU1F1POU domain protein. (291 aa)
ENSUAMP00000000192Uncharacterized protein. (194 aa)
Your Current Organism:
Ursus americanus
NCBI taxonomy Id: 9643
Other names: American black bear, Euarctos americanus, U. americanus
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