STRINGSTRING
NKAP NKAP PPIL1 PPIL1 CRNKL1 CRNKL1 PPIH PPIH RBM42 RBM42 SNRPD2 SNRPD2 SNRPE SNRPE SNRPC SNRPC SNIP1 SNIP1 SF3A3 SF3A3 PRPF3 PRPF3 PRPF6 PRPF6 YJU2 YJU2 SNRPF SNRPF SF3B3 SF3B3 DHX38 DHX38 TXNL4B TXNL4B USP39 USP39 SNRPD1 SNRPD1 SF3B6 SF3B6 DDX42 DDX42 WDR53 WDR53 SNW1 SNW1 NSRP1 NSRP1 CWC25 CWC25 PRPF31 PRPF31 RBM22 RBM22 AQR AQR SF3A2 SF3A2 CACTIN CACTIN PPIL3 PPIL3 G1LHQ8_AILME G1LHQ8_AILME BUD31 BUD31 SLU7 SLU7 SNRPN SNRPN SNRPA1 SNRPA1 DDX23 DDX23 LOC100476365 LOC100476365 PRPF19 PRPF19 SMU1 SMU1 SF3A1 SF3A1 PRPF8 PRPF8 DHX34 DHX34 XAB2 XAB2 WBP4 WBP4 BUD13 BUD13 G1LQ85_AILME G1LQ85_AILME PPIL2 PPIL2 SNRNP200 SNRNP200 PRPF38A PRPF38A LRMDA LRMDA WBP11 WBP11 FAM32A FAM32A SF3B4 SF3B4 SYF2 SYF2 LOC100474683 LOC100474683 TXNL4A TXNL4A PPIG PPIG ZMAT2 ZMAT2 G1LWE0_AILME G1LWE0_AILME WDR55 WDR55 CWC22 CWC22 WDR25 WDR25 CWC27 CWC27 PPWD1 PPWD1 SNRPB SNRPB CWC15 CWC15 CDC5L CDC5L DHX35 DHX35 SNRPA SNRPA CTNNBL1 CTNNBL1 GPKOW GPKOW UBL5 UBL5 PQBP1 PQBP1 CCDC12 CCDC12 PRPF4 PRPF4 DHX16 DHX16 DDX39A DDX39A PRPF18 PRPF18 SF3B1 SF3B1 SNRPD3 SNRPD3 G1M784_AILME G1M784_AILME G1M788_AILME G1M788_AILME SNRNP70 SNRNP70 SDE2 SDE2 RBMX2 RBMX2 G1M8S4_AILME G1M8S4_AILME WDR70 WDR70 MFAP1 MFAP1 ISY1 ISY1 PRKRIP1 PRKRIP1 CWF19L2 CWF19L2 G1MAI4_AILME G1MAI4_AILME PHF5A PHF5A SNRPG SNRPG C9orf78 C9orf78 G1MCC9_AILME G1MCC9_AILME CDC40 CDC40 SNRPB2 SNRPB2 BCAS2 BCAS2 SF3B2 SF3B2 SART1 SART1 TCERG1 TCERG1 SNRNP40 SNRNP40 DDX46 DDX46 PPIL4 PPIL4 DHX8 DHX8 EFTUD2 EFTUD2 PLRG1 PLRG1 LOC100471390 LOC100471390 G1MN57_AILME G1MN57_AILME RNF113A RNF113A
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
NKAPNFKB activating protein. (416 aa)
PPIL1Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (167 aa)
CRNKL1Crooked neck pre-mRNA splicing factor 1. (828 aa)
PPIHPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (177 aa)
RBM42RNA binding motif protein 42. (479 aa)
SNRPD2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (117 aa)
SNRPESmall nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (93 aa)
SNRPCU1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] (181 aa)
SNIP1Smad nuclear interacting protein 1. (397 aa)
SF3A3Splicing factor 3a subunit 3. (501 aa)
PRPF3Pre-mRNA processing factor 3. (683 aa)
PRPF6Pre-mRNA processing factor 6. (950 aa)
YJU2YJU2 splicing factor homolog. (323 aa)
SNRPFSmall nuclear ribonucleoprotein polypeptide F. (85 aa)
SF3B3Splicing factor 3b subunit 3. (1220 aa)
DHX38DEAH-box helicase 38. (1231 aa)
TXNL4BThioredoxin like 4B. (149 aa)
USP39Ubiquitin specific peptidase 39. (565 aa)
SNRPD1Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. (117 aa)
SF3B6Splicing factor 3b subunit 6. (125 aa)
DDX42DEAD-box helicase 42. (935 aa)
WDR53WD repeat domain 53. (358 aa)
SNW1SNW domain containing 1. (536 aa)
NSRP1Nuclear speckle splicing regulatory protein 1. (513 aa)
CWC25CWC25 spliceosome associated protein homolog. (425 aa)
PRPF31Pre-mRNA processing factor 31. (498 aa)
RBM22RNA binding motif protein 22. (420 aa)
AQRRNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing. (1494 aa)
SF3A2Splicing factor 3a subunit 2. (464 aa)
CACTINCactin, spliceosome C complex subunit. (756 aa)
PPIL3Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (160 aa)
G1LHQ8_AILMEUncharacterized protein. (192 aa)
BUD31BUD31 homolog. (144 aa)
SLU7SLU7 homolog, splicing factor. (586 aa)
SNRPNSmall nuclear ribonucleoprotein-associated protein. (244 aa)
SNRPA1Small nuclear ribonucleoprotein polypeptide A. (152 aa)
DDX23DEAD-box helicase 23. (820 aa)
LOC100476365RRM domain-containing protein. (159 aa)
PRPF19Pre-mRNA processing factor 19. (505 aa)
SMU1Uncharacterized protein. (513 aa)
SF3A1Uncharacterized protein. (795 aa)
PRPF8Pre-mRNA processing factor 8. (2335 aa)
DHX34DExH-box helicase 34. (1136 aa)
XAB2XPA binding protein 2. (843 aa)
WBP4WW domain binding protein 4. (377 aa)
BUD13BUD13 homolog. (639 aa)
G1LQ85_AILMEUncharacterized protein. (494 aa)
PPIL2Peptidylprolyl isomerase like 2. (555 aa)
SNRNP200Small nuclear ribonucleoprotein U5 subunit 200. (2136 aa)
PRPF38APre-mRNA processing factor 38A. (312 aa)
LRMDALeucine rich melanocyte differentiation associated. (129 aa)
WBP11Uncharacterized protein. (641 aa)
FAM32AFamily with sequence similarity 32 member A. (112 aa)
SF3B4Splicing factor 3b subunit 4. (424 aa)
SYF2Uncharacterized protein. (243 aa)
LOC100474683Uncharacterized protein. (195 aa)
TXNL4AThioredoxin like 4A. (142 aa)
PPIGPeptidylprolyl isomerase G. (752 aa)
ZMAT2Zinc finger matrin-type 2. (205 aa)
G1LWE0_AILMECwf21 domain-containing protein. (114 aa)
WDR55WD_REPEATS_REGION domain-containing protein. (870 aa)
CWC22CWC22 spliceosome associated protein homolog. (907 aa)
WDR25WD repeat domain 25. (560 aa)
CWC27CWC27 spliceosome associated cyclophilin. (470 aa)
PPWD1Peptidylprolyl isomerase domain and WD repeat containing 1. (646 aa)
SNRPBSmall nuclear ribonucleoprotein-associated protein. (282 aa)
CWC15CWC15 spliceosome associated protein homolog. (231 aa)
CDC5LCell division cycle 5 like. (803 aa)
DHX35DEAH-box helicase 35. (703 aa)
SNRPASmall nuclear ribonucleoprotein polypeptide A. (288 aa)
CTNNBL1Catenin beta like 1. (563 aa)
GPKOWG-patch domain and KOW motifs. (485 aa)
UBL5Ubiquitin like 5. (73 aa)
PQBP1Polyglutamine binding protein 1. (258 aa)
CCDC12Coiled-coil domain containing 12. (166 aa)
PRPF4Pre-mRNA processing factor 4. (534 aa)
DHX16DEAH-box helicase 16. (1043 aa)
DDX39ADExD-box helicase 39A. (435 aa)
PRPF18SFM domain-containing protein. (342 aa)
SF3B1Splicing factor 3b subunit 1. (1305 aa)
SNRPD3Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. (126 aa)
G1M784_AILMEUncharacterized protein. (121 aa)
G1M788_AILMEUncharacterized protein. (108 aa)
SNRNP70Small nuclear ribonucleoprotein U1 subunit 70. (439 aa)
SDE2SDE2 telomere maintenance homolog. (456 aa)
RBMX2RNA binding motif protein X-linked 2. (328 aa)
G1M8S4_AILMEUncharacterized protein. (370 aa)
WDR70WD repeat domain 70. (348 aa)
MFAP1Microfibril associated protein 1. (439 aa)
ISY1Uncharacterized protein. (330 aa)
PRKRIP1PRKR interacting protein 1. (186 aa)
CWF19L2Uncharacterized protein. (637 aa)
G1MAI4_AILMEUncharacterized protein. (78 aa)
PHF5APHD finger protein 5A. (81 aa)
SNRPGSmall nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (96 aa)
C9orf78Chromosome 9 open reading frame 78. (289 aa)
G1MCC9_AILMESNRNP27 domain-containing protein. (155 aa)
CDC40Cell division cycle 40. (447 aa)
SNRPB2Small nuclear ribonucleoprotein polypeptide B2. (225 aa)
BCAS2BCAS2 pre-mRNA processing factor. (226 aa)
SF3B2Splicing factor 3b subunit 2. (897 aa)
SART1Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP. (696 aa)
TCERG1Transcription elongation regulator 1. (1084 aa)
SNRNP40Small nuclear ribonucleoprotein U5 subunit 40. (341 aa)
DDX46DEAD-box helicase 46. (1032 aa)
PPIL4Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. (494 aa)
DHX8DEAH-box helicase 8. (1228 aa)
EFTUD2Elongation factor Tu GTP binding domain containing 2. (972 aa)
PLRG1Pleiotropic regulator 1. (522 aa)
LOC100471390Sm domain-containing protein. (86 aa)
G1MN57_AILMEPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (166 aa)
RNF113ARing finger protein 113A. (349 aa)
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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