STRINGSTRING
HYOU1 HYOU1 TRAPPC4 TRAPPC4 CXorf56 CXorf56 TRAPPC2L TRAPPC2L TRAPPC3 TRAPPC3 TMED7 TMED7 GOLT1A GOLT1A RAB1A RAB1A NRBP1 NRBP1 SEC24B SEC24B COPB1 COPB1 RANGRF RANGRF TRAPPC1 TRAPPC1 SEC16A SEC16A SEC23A SEC23A GOSR1 GOSR1 TFG TFG TRAPPC6B TRAPPC6B MIA2 MIA2 STX17 STX17 SEC22A SEC22A SEC31A SEC31A G1LER2_AILME G1LER2_AILME SCFD1 SCFD1 LMAN2L LMAN2L TRAPPC3L TRAPPC3L COPB2 COPB2 COPG2 COPG2 TSGA13 TSGA13 SEC23B SEC23B ERGIC2 ERGIC2 ZW10 ZW10 STX5 STX5 NRBP2 NRBP2 VAMP7 VAMP7 TMED9 TMED9 G1LJ24_AILME G1LJ24_AILME G1LJ32_AILME G1LJ32_AILME LMAN1 LMAN1 SEC31B SEC31B KDELR2 KDELR2 MIA3 MIA3 G1LJY8_AILME G1LJY8_AILME TMED6 TMED6 YIPF4 YIPF4 SPAST SPAST ANKRD40 ANKRD40 ANKRD40CL ANKRD40CL MPPE1 MPPE1 TRAPPC11 TRAPPC11 PDCD6 PDCD6 BCAP31 BCAP31 LMAN1L LMAN1L TMED5 TMED5 ERGIC3 ERGIC3 TRAPPC8 TRAPPC8 YIPF5 YIPF5 SEC23IP SEC23IP YIF1B YIF1B KDELR3 KDELR3 TMED1 TMED1 TRAPPC13 TRAPPC13 ERGIC1 ERGIC1 COPE COPE SEC24D SEC24D CUL3 CUL3 SEC22B SEC22B KLHL12 KLHL12 TMED3 TMED3 SEC22C SEC22C TRAPPC6A TRAPPC6A ARCN1 ARCN1 SCAP SCAP COG3 COG3 RINT1 RINT1 BCAP29 BCAP29 PGAP1 PGAP1 C2orf66 C2orf66 TBC1D20 TBC1D20 WHAMM WHAMM COPA COPA SEC16B SEC16B USO1 USO1 TRIP11 TRIP11 KDELR1 KDELR1 TMED2 TMED2 COPG1 COPG1 TEX261 TEX261 TRAPPC2 TRAPPC2 CNIH4 CNIH4 SEC13 SEC13 YIPF7 YIPF7 GOLT1B GOLT1B SEC24C SEC24C G1MEN8_AILME G1MEN8_AILME YIF1A YIF1A RAB1B RAB1B YKT6 YKT6 TMED4 TMED4 BET1 BET1 PEF1 PEF1 SAR1B SAR1B SEC24A SEC24A SAR1A SAR1A CREB3L2 CREB3L2 LMAN2 LMAN2 YIPF6 YIPF6 TMED10 TMED10 TRAPPC12 TRAPPC12 FBXW7 FBXW7 TRAPPC5 TRAPPC5 LOC105238537 LOC105238537
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
HYOU1Hypoxia up-regulated 1. (998 aa)
TRAPPC4Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (219 aa)
CXorf56Chromosome X open reading frame 56. (222 aa)
TRAPPC2LTrafficking protein particle complex 2 like. (139 aa)
TRAPPC3Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi. (180 aa)
TMED7GOLD domain-containing protein. (215 aa)
GOLT1AGolgi transport 1A. (135 aa)
RAB1ARAB1A, member RAS oncogene family. (205 aa)
NRBP1Nuclear receptor binding protein 1. (543 aa)
SEC24BSEC24 homolog B, COPII coat complex component. (1216 aa)
COPB1Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (957 aa)
RANGRFRAN guanine nucleotide release factor. (193 aa)
TRAPPC1Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (145 aa)
SEC16AProtein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus. (2362 aa)
SEC23AProtein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (765 aa)
GOSR1Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. (250 aa)
TFGTrafficking from ER to golgi regulator. (403 aa)
TRAPPC6BTrafficking protein particle complex 6B. (158 aa)
MIA2SH3 domain-containing protein. (1334 aa)
STX17Syntaxin 17; Belongs to the syntaxin family. (302 aa)
SEC22ASEC22 homolog A, vesicle trafficking protein; Belongs to the synaptobrevin family. (307 aa)
SEC31ASEC31 homolog A, COPII coat complex component. (1252 aa)
G1LER2_AILMEUncharacterized protein. (464 aa)
SCFD1Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family. (643 aa)
LMAN2LLectin, mannose binding 2 like. (359 aa)
TRAPPC3LTrafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi. (181 aa)
COPB2Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (905 aa)
COPG2Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (874 aa)
TSGA13Testis specific 13. (277 aa)
SEC23BProtein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (679 aa)
ERGIC2ERGIC and golgi 2. (385 aa)
ZW10Zw10 kinetochore protein. (784 aa)
STX5Syntaxin 5; Belongs to the syntaxin family. (355 aa)
NRBP2Nuclear receptor binding protein 2. (457 aa)
VAMP7Vesicle associated membrane protein 7; Belongs to the synaptobrevin family. (220 aa)
TMED9GOLD domain-containing protein. (243 aa)
G1LJ24_AILMEGOLD domain-containing protein. (246 aa)
G1LJ32_AILMEGOLD domain-containing protein. (131 aa)
LMAN1Lectin, mannose binding 1. (516 aa)
SEC31BSEC31 homolog B, COPII coat complex component. (1185 aa)
KDELR2ER lumen protein-retaining receptor. (212 aa)
MIA3Uncharacterized protein. (467 aa)
G1LJY8_AILMESH3 domain-containing protein. (1398 aa)
TMED6GOLD domain-containing protein. (241 aa)
YIPF4Protein YIPF. (244 aa)
SPASTSpastin; ATP-dependent microtubule severing protein that specifically recognizes and cuts microtubules that are polyglutamylated. Preferentially recognizes and acts on microtubules decorated with short polyglutamate tails: severing activity increases as the number of glutamates per tubulin rises from one to eight, but decreases beyond this glutamylation threshold. Severing activity is not dependent on tubulin acetylation or detyrosination. Microtubule severing promotes reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation [...] (617 aa)
ANKRD40Ankyrin repeat domain 40. (323 aa)
ANKRD40CLANKRD40 C-terminal like. (147 aa)
MPPE1Metallophosphoesterase 1; Metallophosphoesterase required for transport of GPI-anchor proteins from the endoplasmic reticulum to the Golgi. Acts in lipid remodeling steps of GPI-anchor maturation by mediating the removal of a side-chain ethanolamine-phosphate (EtNP) from the second Man (Man2) of the GPI intermediate, an essential step for efficient transport of GPI- anchor proteins (By similarity); Belongs to the metallophosphoesterase superfamily. MPPE1 family. (393 aa)
TRAPPC11Trafficking protein particle complex 11. (1134 aa)
PDCD6Programmed cell death 6. (189 aa)
BCAP31B cell receptor associated protein 31. (263 aa)
LMAN1LLectin, mannose binding 1 like. (527 aa)
TMED5Transmembrane p24 trafficking protein 5. (229 aa)
ERGIC3ERGIC and golgi 3. (401 aa)
TRAPPC8Trafficking protein particle complex 8. (1438 aa)
YIPF5Protein YIPF. (257 aa)
SEC23IPSEC23 interacting protein. (1026 aa)
YIF1BYip1 interacting factor homolog B, membrane trafficking protein. (306 aa)
KDELR3ER lumen protein-retaining receptor. (184 aa)
TMED1Transmembrane p24 trafficking protein 1. (227 aa)
TRAPPC13Trafficking protein particle complex 13. (420 aa)
ERGIC1Endoplasmic reticulum-golgi intermediate compartment 1. (290 aa)
COPECoatomer protein complex subunit epsilon. (308 aa)
SEC24DSEC24 homolog D, COPII coat complex component. (1034 aa)
CUL3Cullin 3; Belongs to the cullin family. (791 aa)
SEC22BSEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family. (218 aa)
KLHL12Kelch like family member 12. (571 aa)
TMED3Transmembrane p24 trafficking protein 3. (207 aa)
SEC22CSEC22 homolog C, vesicle trafficking protein; Belongs to the synaptobrevin family. (304 aa)
TRAPPC6ATrafficking protein particle complex 6A. (174 aa)
ARCN1Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (511 aa)
SCAPSREBF chaperone. (1249 aa)
COG3Component of oligomeric golgi complex 3. (831 aa)
RINT1RAD50 interactor 1. (792 aa)
BCAP29B cell receptor associated protein 29. (244 aa)
PGAP1GPI inositol-deacylase; Involved in inositol deacylation of GPI-anchored proteins. GPI inositol deacylation may important for efficient transport of GPI- anchored proteins from the endoplasmic reticulum to the Golgi. (922 aa)
C2orf66Chromosome 2 open reading frame 66. (105 aa)
TBC1D20TBC1 domain family member 20. (381 aa)
WHAMMWASP homolog associated with actin, golgi membranes and microtubules. (755 aa)
COPACoatomer subunit alpha; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. (1233 aa)
SEC16BProtein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus. (1062 aa)
USO1USO1 vesicle transport factor. (943 aa)
TRIP11Thyroid hormone receptor interactor 11. (1979 aa)
KDELR1ER lumen protein-retaining receptor. (212 aa)
TMED2Transmembrane p24 trafficking protein 2. (201 aa)
COPG1Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (874 aa)
TEX261Uncharacterized protein. (196 aa)
TRAPPC2Uncharacterized protein. (146 aa)
CNIH4Cornichon family AMPA receptor auxiliary protein 4. (141 aa)
SEC13SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family. (359 aa)
YIPF7Protein YIPF. (279 aa)
GOLT1BGolgi transport 1B. (138 aa)
SEC24CSEC24 homolog C, COPII coat complex component. (1096 aa)
G1MEN8_AILMEGOLD domain-containing protein. (215 aa)
YIF1AYip1 interacting factor homolog A, membrane trafficking protein. (297 aa)
RAB1BRAB1B, member RAS oncogene family. (201 aa)
YKT6YKT6 v-SNARE homolog; Belongs to the synaptobrevin family. (198 aa)
TMED4Transmembrane p24 trafficking protein 4. (233 aa)
BET1Bet1 golgi vesicular membrane trafficking protein. (118 aa)
PEF1Penta-EF-hand domain containing 1. (289 aa)
SAR1BSecretion associated Ras related GTPase 1B; Belongs to the small GTPase superfamily. SAR1 family. (198 aa)
SEC24ASEC24 homolog A, COPII coat complex component. (1100 aa)
SAR1ASecretion associated Ras related GTPase 1A; Belongs to the small GTPase superfamily. SAR1 family. (198 aa)
CREB3L2cAMP responsive element binding protein 3 like 2. (520 aa)
LMAN2Lectin, mannose binding 2. (351 aa)
YIPF6Protein YIPF. (225 aa)
TMED10Transmembrane p24 trafficking protein 10. (224 aa)
TRAPPC12Trafficking protein particle complex 12. (783 aa)
FBXW7F-box and WD repeat domain containing 7. (708 aa)
TRAPPC5Trafficking protein particle complex 5. (188 aa)
LOC105238537TIR domain-containing protein. (234 aa)
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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