(16 nodes) Stem cell division network (Ailuropoda melanoleuca)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	WWTR1	WW domain containing transcription regulator 1. (400 aa)
	CUL3	Cullin 3; Belongs to the cullin family. (791 aa)
	STRA8	Stimulated by retinoic acid 8. (369 aa)
	ZBTB16	Zinc finger and BTB domain containing 16. (673 aa)
	FUT11	Alpha-(1,3)-fucosyltransferase; Probable fucosyltransferase; Belongs to the glycosyltransferase 10 family. (493 aa)
	NANOG	Homeobox domain-containing protein. (306 aa)
	FZD7	Frizzled class receptor 7; Belongs to the G-protein coupled receptor Fz/Smo family. (525 aa)
	SAMD9L	Sterile alpha motif domain containing 9 like. (1585 aa)
	GNL3	G protein nucleolar 3. (550 aa)
	PANDA_011714	Uncharacterized protein. (124 aa)
	ING2	Inhibitor of growth protein. (280 aa)
	G1LIM1_AILME	Homeobox domain-containing protein. (261 aa)
	BMI1	RING-type domain-containing protein. (326 aa)
	NOTCH1	Notch receptor 1. (2435 aa)
	FUT10	Alpha-(1,3)-fucosyltransferase; Probable fucosyltransferase; Belongs to the glycosyltransferase 10 family. (522 aa)
	EXT1	Uncharacterized protein; Belongs to the glycosyltransferase 47 family. (427 aa)

Your Current Organism:

Ailuropoda melanoleuca

NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BMI1	G1LIM1_AILME	ENSAMEP00000006564	ENSAMEP00000006774	RING-type domain-containing protein.	Homeobox domain-containing protein.	0.536
BMI1	NANOG	ENSAMEP00000006564	ENSAMEP00000018023	RING-type domain-containing protein.	Homeobox domain-containing protein.	0.536
BMI1	NOTCH1	ENSAMEP00000006564	ENSAMEP00000004158	RING-type domain-containing protein.	Notch receptor 1.	0.510
BMI1	ZBTB16	ENSAMEP00000006564	ENSAMEP00000014013	RING-type domain-containing protein.	Zinc finger and BTB domain containing 16.	0.457
CUL3	ZBTB16	ENSAMEP00000012279	ENSAMEP00000014013	Cullin 3; Belongs to the cullin family.	Zinc finger and BTB domain containing 16.	0.531
EXT1	PANDA_011714	ENSAMEP00000002722	ENSAMEP00000020365	Uncharacterized protein; Belongs to the glycosyltransferase 47 family.	Uncharacterized protein.	0.855
G1LIM1_AILME	BMI1	ENSAMEP00000006774	ENSAMEP00000006564	Homeobox domain-containing protein.	RING-type domain-containing protein.	0.536
G1LIM1_AILME	NOTCH1	ENSAMEP00000006774	ENSAMEP00000004158	Homeobox domain-containing protein.	Notch receptor 1.	0.452
NANOG	BMI1	ENSAMEP00000018023	ENSAMEP00000006564	Homeobox domain-containing protein.	RING-type domain-containing protein.	0.536
NANOG	NOTCH1	ENSAMEP00000018023	ENSAMEP00000004158	Homeobox domain-containing protein.	Notch receptor 1.	0.452
NOTCH1	BMI1	ENSAMEP00000004158	ENSAMEP00000006564	Notch receptor 1.	RING-type domain-containing protein.	0.510
NOTCH1	G1LIM1_AILME	ENSAMEP00000004158	ENSAMEP00000006774	Notch receptor 1.	Homeobox domain-containing protein.	0.452
NOTCH1	NANOG	ENSAMEP00000004158	ENSAMEP00000018023	Notch receptor 1.	Homeobox domain-containing protein.	0.452
PANDA_011714	EXT1	ENSAMEP00000020365	ENSAMEP00000002722	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyltransferase 47 family.	0.855
STRA8	ZBTB16	ENSAMEP00000012767	ENSAMEP00000014013	Stimulated by retinoic acid 8.	Zinc finger and BTB domain containing 16.	0.677
ZBTB16	BMI1	ENSAMEP00000014013	ENSAMEP00000006564	Zinc finger and BTB domain containing 16.	RING-type domain-containing protein.	0.457
ZBTB16	CUL3	ENSAMEP00000014013	ENSAMEP00000012279	Zinc finger and BTB domain containing 16.	Cullin 3; Belongs to the cullin family.	0.531
ZBTB16	STRA8	ENSAMEP00000014013	ENSAMEP00000012767	Zinc finger and BTB domain containing 16.	Stimulated by retinoic acid 8.	0.677