(12 nodes) Vocalization behavior network (Ailuropoda melanoleuca)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SHANK3	SH3 and multiple ankyrin repeat domains 3. (1644 aa)
	EXT1	Uncharacterized protein; Belongs to the glycosyltransferase 47 family. (427 aa)
	PANDA_011714	Uncharacterized protein. (124 aa)
	NEUROG1	Neurogenin 1. (225 aa)
	DLG4	Discs large MAGUK scaffold protein 4; Belongs to the MAGUK family. (761 aa)
	NLGN3	Neuroligin 3. (879 aa)
	NRXN1	Neurexin 1. (1239 aa)
	MYH14	Myosin heavy chain 14; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2034 aa)
	SHANK1	SH3 and multiple ankyrin repeat domains 1. (1687 aa)
	GLI3	GLI family zinc finger 3. (1586 aa)
	SHANK2	SH3 and multiple ankyrin repeat domains 2. (1822 aa)
	BRINP1	BMP/retinoic acid inducible neural specific 1. (689 aa)

Your Current Organism:

Ailuropoda melanoleuca

NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DLG4	NLGN3	ENSAMEP00000017365	ENSAMEP00000016907	Discs large MAGUK scaffold protein 4; Belongs to the MAGUK family.	Neuroligin 3.	0.741
DLG4	NRXN1	ENSAMEP00000017365	ENSAMEP00000014727	Discs large MAGUK scaffold protein 4; Belongs to the MAGUK family.	Neurexin 1.	0.554
DLG4	SHANK1	ENSAMEP00000017365	ENSAMEP00000013610	Discs large MAGUK scaffold protein 4; Belongs to the MAGUK family.	SH3 and multiple ankyrin repeat domains 1.	0.744
DLG4	SHANK2	ENSAMEP00000017365	ENSAMEP00000007855	Discs large MAGUK scaffold protein 4; Belongs to the MAGUK family.	SH3 and multiple ankyrin repeat domains 2.	0.751
DLG4	SHANK3	ENSAMEP00000017365	ENSAMEP00000003318	Discs large MAGUK scaffold protein 4; Belongs to the MAGUK family.	SH3 and multiple ankyrin repeat domains 3.	0.717
EXT1	PANDA_011714	ENSAMEP00000002722	ENSAMEP00000020365	Uncharacterized protein; Belongs to the glycosyltransferase 47 family.	Uncharacterized protein.	0.855
NLGN3	DLG4	ENSAMEP00000016907	ENSAMEP00000017365	Neuroligin 3.	Discs large MAGUK scaffold protein 4; Belongs to the MAGUK family.	0.741
NLGN3	NRXN1	ENSAMEP00000016907	ENSAMEP00000014727	Neuroligin 3.	Neurexin 1.	0.964
NLGN3	SHANK1	ENSAMEP00000016907	ENSAMEP00000013610	Neuroligin 3.	SH3 and multiple ankyrin repeat domains 1.	0.686
NLGN3	SHANK2	ENSAMEP00000016907	ENSAMEP00000007855	Neuroligin 3.	SH3 and multiple ankyrin repeat domains 2.	0.731
NLGN3	SHANK3	ENSAMEP00000016907	ENSAMEP00000003318	Neuroligin 3.	SH3 and multiple ankyrin repeat domains 3.	0.800
NRXN1	DLG4	ENSAMEP00000014727	ENSAMEP00000017365	Neurexin 1.	Discs large MAGUK scaffold protein 4; Belongs to the MAGUK family.	0.554
NRXN1	NLGN3	ENSAMEP00000014727	ENSAMEP00000016907	Neurexin 1.	Neuroligin 3.	0.964
NRXN1	SHANK1	ENSAMEP00000014727	ENSAMEP00000013610	Neurexin 1.	SH3 and multiple ankyrin repeat domains 1.	0.572
NRXN1	SHANK2	ENSAMEP00000014727	ENSAMEP00000007855	Neurexin 1.	SH3 and multiple ankyrin repeat domains 2.	0.410
NRXN1	SHANK3	ENSAMEP00000014727	ENSAMEP00000003318	Neurexin 1.	SH3 and multiple ankyrin repeat domains 3.	0.617
PANDA_011714	EXT1	ENSAMEP00000020365	ENSAMEP00000002722	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyltransferase 47 family.	0.855
SHANK1	DLG4	ENSAMEP00000013610	ENSAMEP00000017365	SH3 and multiple ankyrin repeat domains 1.	Discs large MAGUK scaffold protein 4; Belongs to the MAGUK family.	0.744
SHANK1	NLGN3	ENSAMEP00000013610	ENSAMEP00000016907	SH3 and multiple ankyrin repeat domains 1.	Neuroligin 3.	0.686
SHANK1	NRXN1	ENSAMEP00000013610	ENSAMEP00000014727	SH3 and multiple ankyrin repeat domains 1.	Neurexin 1.	0.572