(15 nodes) TRIAD supradomain network (Ailuropoda melanoleuca)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RNF31	Uncharacterized protein. (1078 aa)
	PRKN	Ubiquitin-like domain-containing protein. (287 aa)
	RBCK1	RANBP2-type and C3HC4-type zinc finger containing 1. (510 aa)
	RNF144A	RBR-type E3 ubiquitin transferase. (303 aa)
	ARIH2	RBR-type E3 ubiquitin transferase. (491 aa)
	CUL9	Cullin 9; Belongs to the cullin family. (2521 aa)
	RNF14	RBR-type E3 ubiquitin transferase. (476 aa)
	RNF217	RBR-type E3 ubiquitin transferase. (235 aa)
	RNF144B	RBR-type E3 ubiquitin transferase. (303 aa)
	RNF19B	RBR-type E3 ubiquitin transferase. (610 aa)
	RNF216	Ring finger protein 216. (928 aa)
	ARIH1	RBR-type E3 ubiquitin transferase. (459 aa)
	ANKIB1	RBR-type E3 ubiquitin transferase. (1092 aa)
	RNF19A	RBR-type E3 ubiquitin transferase. (838 aa)
	PANDA_009467	zf-RING_14 domain-containing protein. (74 aa)

Your Current Organism:

Ailuropoda melanoleuca

NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANKIB1	ARIH2	ENSAMEP00000005979	ENSAMEP00000013772	RBR-type E3 ubiquitin transferase.	RBR-type E3 ubiquitin transferase.	0.421
ANKIB1	RNF216	ENSAMEP00000005979	ENSAMEP00000007006	RBR-type E3 ubiquitin transferase.	Ring finger protein 216.	0.547
ANKIB1	RNF31	ENSAMEP00000005979	ENSAMEP00000017306	RBR-type E3 ubiquitin transferase.	Uncharacterized protein.	0.421
ARIH1	ARIH2	ENSAMEP00000006214	ENSAMEP00000013772	RBR-type E3 ubiquitin transferase.	RBR-type E3 ubiquitin transferase.	0.421
ARIH1	RNF216	ENSAMEP00000006214	ENSAMEP00000007006	RBR-type E3 ubiquitin transferase.	Ring finger protein 216.	0.451
ARIH1	RNF31	ENSAMEP00000006214	ENSAMEP00000017306	RBR-type E3 ubiquitin transferase.	Uncharacterized protein.	0.425
ARIH2	ANKIB1	ENSAMEP00000013772	ENSAMEP00000005979	RBR-type E3 ubiquitin transferase.	RBR-type E3 ubiquitin transferase.	0.421
ARIH2	ARIH1	ENSAMEP00000013772	ENSAMEP00000006214	RBR-type E3 ubiquitin transferase.	RBR-type E3 ubiquitin transferase.	0.421
ARIH2	CUL9	ENSAMEP00000013772	ENSAMEP00000013097	RBR-type E3 ubiquitin transferase.	Cullin 9; Belongs to the cullin family.	0.421
ARIH2	RBCK1	ENSAMEP00000013772	ENSAMEP00000014783	RBR-type E3 ubiquitin transferase.	RANBP2-type and C3HC4-type zinc finger containing 1.	0.446
ARIH2	RNF144A	ENSAMEP00000013772	ENSAMEP00000014033	RBR-type E3 ubiquitin transferase.	RBR-type E3 ubiquitin transferase.	0.421
ARIH2	RNF144B	ENSAMEP00000013772	ENSAMEP00000008860	RBR-type E3 ubiquitin transferase.	RBR-type E3 ubiquitin transferase.	0.421
ARIH2	RNF19A	ENSAMEP00000013772	ENSAMEP00000000441	RBR-type E3 ubiquitin transferase.	RBR-type E3 ubiquitin transferase.	0.441
ARIH2	RNF19B	ENSAMEP00000013772	ENSAMEP00000007821	RBR-type E3 ubiquitin transferase.	RBR-type E3 ubiquitin transferase.	0.441
ARIH2	RNF217	ENSAMEP00000013772	ENSAMEP00000010134	RBR-type E3 ubiquitin transferase.	RBR-type E3 ubiquitin transferase.	0.421
CUL9	ARIH2	ENSAMEP00000013097	ENSAMEP00000013772	Cullin 9; Belongs to the cullin family.	RBR-type E3 ubiquitin transferase.	0.421
CUL9	RNF216	ENSAMEP00000013097	ENSAMEP00000007006	Cullin 9; Belongs to the cullin family.	Ring finger protein 216.	0.429
CUL9	RNF31	ENSAMEP00000013097	ENSAMEP00000017306	Cullin 9; Belongs to the cullin family.	Uncharacterized protein.	0.435
PANDA_009467	PRKN	ENSAMEP00000016753	ENSAMEP00000016749	zf-RING_14 domain-containing protein.	Ubiquitin-like domain-containing protein.	0.497
PRKN	PANDA_009467	ENSAMEP00000016749	ENSAMEP00000016753	Ubiquitin-like domain-containing protein.	zf-RING_14 domain-containing protein.	0.497