STRINGSTRING
HDAC2 HDAC2 MTA1 MTA1 POLR2K POLR2K DMTF1 DMTF1 H2AZ1 H2AZ1 MNAT1 MNAT1 CHD3 CHD3 POLR2E POLR2E CDK7 CDK7 LOC100465141 LOC100465141 MBD3 MBD3 G1LA80_AILME G1LA80_AILME TTF1 TTF1 C11orf88 C11orf88 G1LGB9_AILME G1LGB9_AILME POLR1A POLR1A TAF1C TAF1C MTA2 MTA2 TAF1A TAF1A RBBP4 RBBP4 HDAC1 HDAC1 G1LN24_AILME G1LN24_AILME TWISTNB TWISTNB MTA3 MTA3 GTF2H5 GTF2H5 LOC100470602 LOC100470602 CHD5 CHD5 G1LU99_AILME G1LU99_AILME G1LUA4_AILME G1LUA4_AILME POLR1E POLR1E RBBP7 RBBP7 POLR2F POLR2F ERCC6 ERCC6 TBPL2 TBPL2 POLR1B POLR1B AIRE AIRE RRN3 RRN3 TAF1B TAF1B GATAD2A GATAD2A GATAD2B GATAD2B POLR1C POLR1C CD3EAP CD3EAP ERCC2 ERCC2 TAF1D TAF1D EHMT2 EHMT2 GTF2H4 GTF2H4 CCNH CCNH CHD4 CHD4 H3-3A H3-3A MAPK3 MAPK3 GTF2H3 GTF2H3 G1MBX0_AILME G1MBX0_AILME G1MBX7_AILME G1MBX7_AILME TBPL1 TBPL1 ZNRD1 ZNRD1 G1MCJ8_AILME G1MCJ8_AILME ERCC3 ERCC3 CHD3-2 CHD3-2 POLR2H POLR2H TBP TBP MBD2 MBD2 H2AZ2 H2AZ2 GTF2H1 GTF2H1 UBN2 UBN2 UBTF UBTF LOC100469449 LOC100469449 LOC100480024 LOC100480024 LOC100465110 LOC100465110 LOC100480024-2 LOC100480024-2 LOC100466870 LOC100466870 ENSAMEP00000019566 ENSAMEP00000019566 LOC100464112 LOC100464112 LOC100471214 LOC100471214 LOC100480024-3 LOC100480024-3 LOC100465110-2 LOC100465110-2 G1MJU4_AILME G1MJU4_AILME LOC100466624 LOC100466624 MBD3L1 MBD3L1 G1MM28_AILME G1MM28_AILME H4C14 H4C14 ENSAMEP00000020408 ENSAMEP00000020408 ENSAMEP00000020416 ENSAMEP00000020416 G1MM49_AILME G1MM49_AILME G1MMD8_AILME G1MMD8_AILME LOC100465822 LOC100465822 LOC100480024-4 LOC100480024-4 ENSAMEP00000020621 ENSAMEP00000020621 LOC100465110-3 LOC100465110-3 LOC100480024-5 LOC100480024-5 LOC100480024-6 LOC100480024-6 LOC100465110-4 LOC100465110-4 LOC100469449-2 LOC100469449-2 LOC100465110-5 LOC100465110-5 LOC100465110-6 LOC100465110-6 G1MNN7_AILME G1MNN7_AILME LOC100480024-7 LOC100480024-7 ENSAMEP00000020998 ENSAMEP00000020998 LOC100480024-8 LOC100480024-8 LOC100465110-7 LOC100465110-7 LOC100464367 LOC100464367 LOC100480024-9 LOC100480024-9 LOC100480024-10 LOC100480024-10 G1MNR5_AILME G1MNR5_AILME LOC100465110-8 LOC100465110-8 LOC100468151 LOC100468151 LOC100468404 LOC100468404
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
HDAC2Histone deacetylase 2. (578 aa)
MTA1Metastasis associated 1. (712 aa)
POLR2KRNA polymerase II subunit K. (58 aa)
DMTF1Cyclin D binding myb like transcription factor 1. (762 aa)
H2AZ1Histone H2A; Belongs to the histone H2A family. (128 aa)
MNAT1MNAT1 component of CDK activating kinase. (309 aa)
CHD3Chromodomain helicase DNA binding protein 3. (1364 aa)
POLR2ERNA polymerase II subunit E. (210 aa)
CDK7Cyclin dependent kinase 7; Belongs to the protein kinase superfamily. (354 aa)
LOC100465141General transcription factor IIH subunit. (395 aa)
MBD3Methyl-CpG binding domain protein 3. (259 aa)
G1LA80_AILMEWD_REPEATS_REGION domain-containing protein. (395 aa)
TTF1Transcription termination factor 1. (768 aa)
C11orf88Chromosome 11 open reading frame 88. (177 aa)
G1LGB9_AILMEHistone domain-containing protein; Belongs to the histone H2B family. (141 aa)
POLR1ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1716 aa)
TAF1CTATA-box binding protein associated factor, RNA polymerase I subunit C. (852 aa)
MTA2Metastasis associated 1 family member 2. (666 aa)
TAF1ATATA-box binding protein associated factor, RNA polymerase I subunit A. (450 aa)
RBBP4WD_REPEATS_REGION domain-containing protein. (419 aa)
HDAC1Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. (485 aa)
G1LN24_AILMEHistone H2B; Belongs to the histone H2B family. (137 aa)
TWISTNBTWIST neighbor. (391 aa)
MTA3Metastasis associated 1 family member 3. (587 aa)
GTF2H5General transcription factor IIH subunit 5. (71 aa)
LOC100470602Histone H3; Belongs to the histone H3 family. (136 aa)
CHD5Chromodomain helicase DNA binding protein 5. (1922 aa)
G1LU99_AILMEHistone H2B; Belongs to the histone H2B family. (172 aa)
G1LUA4_AILMEHistone H3; Belongs to the histone H3 family. (135 aa)
POLR1ERNA polymerase I subunit E. (480 aa)
RBBP7RB binding protein 7, chromatin remodeling factor. (469 aa)
POLR2FRNA polymerase II subunit F. (127 aa)
ERCC6ERCC excision repair 6, chromatin remodeling factor. (1481 aa)
TBPL2Uncharacterized protein. (263 aa)
POLR1BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1135 aa)
AIREAutoimmune regulator. (553 aa)
RRN3RRN3 homolog, RNA polymerase I transcription factor. (654 aa)
TAF1BTATA-box binding protein associated factor, RNA polymerase I subunit B. (593 aa)
GATAD2AGATA zinc finger domain containing 2A. (636 aa)
GATAD2BGATA zinc finger domain containing 2B. (593 aa)
POLR1CRNA polymerase I and III subunit C. (348 aa)
CD3EAPCD3e molecule associated protein. (524 aa)
ERCC2ERCC excision repair 2, TFIIH core complex helicase subunit. (762 aa)
TAF1DTATA-box binding protein associated factor, RNA polymerase I subunit D. (276 aa)
EHMT2Euchromatic histone lysine methyltransferase 2. (1270 aa)
GTF2H4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (463 aa)
CCNHCyclin H; Belongs to the cyclin family. (323 aa)
CHD4Uncharacterized protein. (1929 aa)
H3-3AHistone H3.3. (136 aa)
MAPK3Mitogen-activated protein kinase. (351 aa)
GTF2H3General transcription factor IIH subunit 3. (309 aa)
G1MBX0_AILMEHistone H2B; Belongs to the histone H2B family. (136 aa)
G1MBX7_AILMEHistone H2B; Belongs to the histone H2B family. (135 aa)
TBPL1TATA-box binding protein like 1. (186 aa)
ZNRD1DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (135 aa)
G1MCJ8_AILMESprT-like domain-containing protein. (364 aa)
ERCC3ERCC excision repair 3, TFIIH core complex helicase subunit. (778 aa)
CHD3-2Uncharacterized protein. (561 aa)
POLR2HDNA-directed RNA polymerase II polypeptide H. (150 aa)
TBPTATA-box binding protein. (324 aa)
MBD2Methyl-CpG binding domain protein 2. (287 aa)
H2AZ2Histone H2A; Belongs to the histone H2A family. (127 aa)
GTF2H1General transcription factor IIH subunit 1. (547 aa)
UBN2Ubinuclein 2. (1233 aa)
UBTFUpstream binding transcription factor. (764 aa)
LOC100469449Histone domain-containing protein; Belongs to the histone H2B family. (126 aa)
LOC100480024Histone H3; Belongs to the histone H3 family. (136 aa)
LOC100465110Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
LOC100480024-2Histone H3.1. (136 aa)
LOC100466870Histone domain-containing protein; Belongs to the histone H2B family. (124 aa)
ENSAMEP00000019566annotation not available (96 aa)
LOC100464112Histone H2B type 1. (126 aa)
LOC100471214Histone domain-containing protein; Belongs to the histone H2B family. (137 aa)
LOC100480024-3Histone H3.1. (136 aa)
LOC100465110-2Histone H4. (103 aa)
G1MJU4_AILMEHistone H3; Belongs to the histone H3 family. (133 aa)
LOC100466624Histone H2B type 2-E. (126 aa)
MBD3L1Methyl-CpG binding domain protein 3 like 1. (187 aa)
G1MM28_AILMEHistone H2A; Belongs to the histone H2A family. (107 aa)
H4C14Histone H4. (103 aa)
ENSAMEP00000020408annotation not available (107 aa)
ENSAMEP00000020416annotation not available (107 aa)
G1MM49_AILMEHistone domain-containing protein; Belongs to the histone H2B family. (136 aa)
G1MMD8_AILMEHistone domain-containing protein; Belongs to the histone H2B family. (126 aa)
LOC100465822Uncharacterized protein. (183 aa)
LOC100480024-4Histone H3.1. (136 aa)
ENSAMEP00000020621annotation not available (96 aa)
LOC100465110-3Histone H4. (103 aa)
LOC100480024-5Histone H3.1. (136 aa)
LOC100480024-6Histone H3.1. (136 aa)
LOC100465110-4Histone H4. (103 aa)
LOC100469449-2Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC100465110-5Histone H4. (103 aa)
LOC100465110-6Histone H4. (103 aa)
G1MNN7_AILMEHistone domain-containing protein. (136 aa)
LOC100480024-7Histone H3.1. (136 aa)
ENSAMEP00000020998annotation not available (98 aa)
LOC100480024-8Histone H3.1. (136 aa)
LOC100465110-7Histone H4. (103 aa)
LOC100464367Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
LOC100480024-9Histone H3.1. (136 aa)
LOC100480024-10Histone H3.1. (136 aa)
G1MNR5_AILMEHistone H2B; Belongs to the histone H2B family. (135 aa)
LOC100465110-8Histone H4. (103 aa)
LOC100468151Histone H2B; Belongs to the histone H2B family. (127 aa)
LOC100468404Histone H2B; Belongs to the histone H2B family. (127 aa)
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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