STRINGSTRING
RAB39B RAB39B TRAPPC4 TRAPPC4 HPS1 HPS1 MORN4 MORN4 RAB6B RAB6B RIN2 RIN2 GDI1 GDI1 TRAPPC3 TRAPPC3 RAB21 RAB21 MORN5 MORN5 RAB5A RAB5A RAB14 RAB14 RAB1A RAB1A VPS9D1 VPS9D1 DENND3 DENND3 RSPH1 RSPH1 GDI2 GDI2 RAB39A RAB39A GAREM2 GAREM2 RAB10 RAB10 DENND6B DENND6B DENND4C DENND4C TRAPPC1 TRAPPC1 DENND4A DENND4A RAB5B RAB5B SBF2 SBF2 TRAPPC6B TRAPPC6B JPH2 JPH2 DENND5A DENND5A DENND2B DENND2B ULK2 ULK2 RAB35 RAB35 TRAPPC3L TRAPPC3L DENND2D DENND2D RAB5C RAB5C RAB32 RAB32 DENND1C DENND1C MADD MADD RAB12 RAB12 RAB31 RAB31 AKT1 AKT1 YWHAE YWHAE TRAPPC11 TRAPPC11 RINL RINL CCZ1 CCZ1 LOC100478867 LOC100478867 DENND5B DENND5B AKT3 AKT3 SH3YL1 SH3YL1 RGP1 RGP1 ANKRD27 ANKRD27 RAB8A RAB8A RIC1 RIC1 GAREM1 GAREM1 TRAPPC8 TRAPPC8 RAB3GAP2 RAB3GAP2 CHM CHM TRAPPC10 TRAPPC10 DENND1A DENND1A RAB3A RAB3A TRAPPC13 TRAPPC13 DENND6A DENND6A PANDA_011192 PANDA_011192 RAB13 RAB13 DENND4B DENND4B MON1A MON1A GRIPAP1 GRIPAP1 ALS2CL ALS2CL AKT2 AKT2 TRAPPC6A TRAPPC6A RAB7B RAB7B ALS2 ALS2 MORN1 MORN1 RIN3 RIN3 MORN3 MORN3 MON1B MON1B RAB38 RAB38 RAB7A RAB7A JPH1 JPH1 TRAPPC2 TRAPPC2 RAB18 RAB18 RAB3GAP1 RAB3GAP1 JPH4 JPH4 GAPVD1 GAPVD1 RAB3IL1 RAB3IL1 ANKMY1 ANKMY1 RIN1 RIN1 RAB1B RAB1B DENND2C DENND2C RAB27B RAB27B WDR54 WDR54 RAB6A RAB6A DENND1B DENND1B DENND2A DENND2A HPS4 HPS4 KCTD7 KCTD7 JPH3 JPH3 RAB27A RAB27A TRAPPC12 TRAPPC12 RAB9B RAB9B RAB9A RAB9A
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RAB39BRAB39B, member RAS oncogene family. (213 aa)
TRAPPC4Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (219 aa)
HPS1HPS1 biogenesis of lysosomal organelles complex 3 subunit 1. (700 aa)
MORN4MORN repeat containing 4. (200 aa)
RAB6BRAB6B, member RAS oncogene family. (208 aa)
RIN2Ras and Rab interactor 2. (881 aa)
GDI1Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. (447 aa)
TRAPPC3Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi. (180 aa)
RAB21RAB21, member RAS oncogene family. (225 aa)
MORN5MORN repeat containing 5. (173 aa)
RAB5ARAB5A, member RAS oncogene family. (215 aa)
RAB14RAB14, member RAS oncogene family. (217 aa)
RAB1ARAB1A, member RAS oncogene family. (205 aa)
VPS9D1VPS9 domain containing 1. (629 aa)
DENND3DENN domain containing 3. (1241 aa)
RSPH1Radial spoke head component 1. (314 aa)
GDI2Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. (506 aa)
RAB39ARAB39A, member RAS oncogene family. (216 aa)
GAREM2GRB2 associated regulator of MAPK1 subtype 2. (853 aa)
RAB10RAB10, member RAS oncogene family. (200 aa)
DENND6BDENN domain containing 6B. (527 aa)
DENND4CDENN domain containing 4C. (1955 aa)
TRAPPC1Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (145 aa)
DENND4ADENN domain containing 4A. (1938 aa)
RAB5BRAB5B, member RAS oncogene family. (217 aa)
SBF2SET binding factor 2. (1832 aa)
TRAPPC6BTrafficking protein particle complex 6B. (158 aa)
JPH2Junctophilin 2. (650 aa)
DENND5ADENN domain containing 5A. (1281 aa)
DENND2BSuppression of tumorigenicity 5. (1133 aa)
ULK2Unc-51 like autophagy activating kinase 2. (1005 aa)
RAB35RAB35, member RAS oncogene family. (201 aa)
TRAPPC3LTrafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi. (181 aa)
DENND2DDENN domain containing 2D. (471 aa)
RAB5CUncharacterized protein. (216 aa)
RAB32RAB32, member RAS oncogene family. (226 aa)
DENND1CDENN domain containing 1C. (618 aa)
MADDMAP kinase activating death domain. (1647 aa)
RAB12RAB12, member RAS oncogene family. (231 aa)
RAB31RAB31, member RAS oncogene family. (195 aa)
AKT1Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (480 aa)
YWHAETyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon; Belongs to the 14-3-3 family. (255 aa)
TRAPPC11Trafficking protein particle complex 11. (1134 aa)
RINLRas and Rab interactor like. (413 aa)
CCZ1Uncharacterized protein. (482 aa)
LOC100478867Uncharacterized protein. (872 aa)
DENND5BDENN domain containing 5B. (1285 aa)
AKT3Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (479 aa)
SH3YL1SH3 and SYLF domain containing 1. (342 aa)
RGP1RGP1 homolog, RAB6A GEF complex partner 1. (399 aa)
ANKRD27Ankyrin repeat domain 27. (1053 aa)
RAB8ARAB8A, member RAS oncogene family. (207 aa)
RIC1RIC1 homolog, RAB6A GEF complex partner 1. (1419 aa)
GAREM1GRB2 associated regulator of MAPK1 subtype 1. (876 aa)
TRAPPC8Trafficking protein particle complex 8. (1438 aa)
RAB3GAP2RAB3 GTPase activating non-catalytic protein subunit 2. (1400 aa)
CHMRab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. (620 aa)
TRAPPC10Uncharacterized protein. (1258 aa)
DENND1ADENN domain containing 1A. (735 aa)
RAB3ARAB3A, member RAS oncogene family. (228 aa)
TRAPPC13Trafficking protein particle complex 13. (420 aa)
DENND6ADENN domain containing 6A. (585 aa)
PANDA_011192Sec2p domain-containing protein. (468 aa)
RAB13Uncharacterized protein. (238 aa)
DENND4BDENN domain containing 4B. (1501 aa)
MON1AMON1 homolog A, secretory trafficking associated. (572 aa)
GRIPAP1GRIP1 associated protein 1. (842 aa)
ALS2CLALS2 C-terminal like. (953 aa)
AKT2Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (481 aa)
TRAPPC6ATrafficking protein particle complex 6A. (174 aa)
RAB7BRAB7B, member RAS oncogene family. (200 aa)
ALS2Alsin Rho guanine nucleotide exchange factor ALS2. (1662 aa)
MORN1MORN repeat containing 1. (485 aa)
RIN3Ras and Rab interactor 3. (966 aa)
MORN3MORN repeat containing 3. (241 aa)
MON1BMON1 homolog B, secretory trafficking associated. (551 aa)
RAB38RAB38, member RAS oncogene family. (213 aa)
RAB7ARAB7A, member RAS oncogene family. (207 aa)
JPH1Junctophilin; Junctophilins contribute to the formation of junctional membrane complexes (JMCs) which link the plasma membrane with the endoplasmic or sarcoplasmic reticulum in excitable cells. Provides a structural foundation for functional cross-talk between the cell surface and intracellular calcium release channels. (662 aa)
TRAPPC2Uncharacterized protein. (146 aa)
RAB18RAB18, member RAS oncogene family. (236 aa)
RAB3GAP1RAB3 GTPase activating protein catalytic subunit 1. (985 aa)
JPH4Junctophilin 4. (515 aa)
GAPVD1GTPase activating protein and VPS9 domains 1. (1461 aa)
RAB3IL1RAB3A interacting protein like 1. (382 aa)
ANKMY1Ankyrin repeat and MYND domain containing 1. (932 aa)
RIN1Ras and Rab interactor 1. (791 aa)
RAB1BRAB1B, member RAS oncogene family. (201 aa)
DENND2CDENN domain containing 2C. (930 aa)
RAB27BRAB27B, member RAS oncogene family. (218 aa)
WDR54WD repeat domain 54. (334 aa)
RAB6ARAB6A, member RAS oncogene family. (255 aa)
DENND1BDENN domain containing 1B. (753 aa)
DENND2ADENN domain containing 2A. (1022 aa)
HPS4HPS4 biogenesis of lysosomal organelles complex 3 subunit 2. (713 aa)
KCTD7Uncharacterized protein. (704 aa)
JPH3Junctophilin; Junctophilins contribute to the formation of junctional membrane complexes (JMCs) which link the plasma membrane with the endoplasmic or sarcoplasmic reticulum in excitable cells. Provides a structural foundation for functional cross-talk between the cell surface and intracellular calcium release channels. (754 aa)
RAB27ARAB27A, member RAS oncogene family. (221 aa)
TRAPPC12Trafficking protein particle complex 12. (783 aa)
RAB9BRAB9B, member RAS oncogene family. (201 aa)
RAB9ARAB9A, member RAS oncogene family. (201 aa)
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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