STRINGSTRING
ATG4B ATG4B M3XML9_MUSPF M3XML9_MUSPF SQSTM1 SQSTM1 ATG12 ATG12 ATG4A ATG4A ATG16L1 ATG16L1 GABARAPL1 GABARAPL1 M3Y6T5_MUSPF M3Y6T5_MUSPF ATG4C ATG4C ATG10 ATG10 M3YAV7_MUSPF M3YAV7_MUSPF ATG5 ATG5 ATG16L2 ATG16L2 NBR1 NBR1 GABARAPL2 GABARAPL2 GABARAP GABARAP WIPI1 WIPI1 ATG7 ATG7 MAP1LC3A MAP1LC3A
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ATG4BCysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (393 aa)
M3XML9_MUSPFAutophagy-related protein 3. (314 aa)
SQSTM1Sequestosome 1. (371 aa)
ATG12Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (140 aa)
ATG4ACysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (398 aa)
ATG16L1Autophagy related 16 like 1. (623 aa)
GABARAPL1GABA type A receptor associated protein like 1. (123 aa)
M3Y6T5_MUSPFAutophagy-related protein 3. (293 aa)
ATG4CCysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (458 aa)
ATG10Autophagy related 10. (216 aa)
M3YAV7_MUSPFUncharacterized protein. (149 aa)
ATG5Autophagy protein 5; Involved in autophagic vesicle formation. (275 aa)
ATG16L2Autophagy related 16 like 2. (620 aa)
NBR1NBR1 autophagy cargo receptor. (958 aa)
GABARAPL2GABA type A receptor associated protein like 2. (120 aa)
GABARAPGABA type A receptor-associated protein. (122 aa)
WIPI1WD repeat domain, phosphoinositide interacting 1. (479 aa)
ATG7Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 as well as the ATG8 family proteins for their conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Required for autophagic death induced by caspase-8 inhibition. Required for mitophagy which contributes to regulate mitochondrial quantity and quality by eliminating the mitochondria [...] (788 aa)
MAP1LC3AMicrotubule associated protein 1 light chain 3 alpha. (176 aa)
Your Current Organism:
Mustela putorius
NCBI taxonomy Id: 9669
Other names: M. putorius furo, Mustela furo, Mustela putorius furo, black ferret, domestic ferret, ferret
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