STRINGSTRING
SUPT16H SUPT16H SSRP1 SSRP1 POLR2H POLR2H POLR2C POLR2C CDC73 CDC73 POLR2B POLR2B POLR2I POLR2I LEO1 LEO1 POLR2E POLR2E POLR2A POLR2A CTR9 CTR9 POLR2F POLR2F POLR2G POLR2G SUPT4H1 SUPT4H1 TCEA3 TCEA3 POLR2D POLR2D SUPT5H SUPT5H PAF1 PAF1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SUPT16HSPT16 homolog, facilitates chromatin remodeling subunit. (1047 aa)
SSRP1FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (709 aa)
POLR2HDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
POLR2CRNA polymerase II subunit C. (275 aa)
CDC73Cell division cycle 73. (531 aa)
POLR2BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
POLR2IDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
LEO1LEO1 homolog, Paf1/RNA polymerase II complex component. (664 aa)
POLR2ERNA polymerase II subunit E. (210 aa)
POLR2ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1970 aa)
CTR9CTR9 homolog, Paf1/RNA polymerase II complex component. (1173 aa)
POLR2FRNA polymerase II subunit F. (127 aa)
POLR2GRNA polymerase II subunit G. (172 aa)
SUPT4H1Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. (120 aa)
TCEA3Transcription elongation factor A3. (350 aa)
POLR2DRNA polymerase II subunit D. (142 aa)
SUPT5HSPT5 homolog, DSIF elongation factor subunit. (1087 aa)
PAF1PAF1 homolog, Paf1/RNA polymerase II complex component. (554 aa)
Your Current Organism:
Mustela putorius
NCBI taxonomy Id: 9669
Other names: M. putorius furo, Mustela furo, Mustela putorius furo, black ferret, domestic ferret, ferret
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