16 items (Mustela putorius) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TBX2	T-box transcription factor 2. (679 aa)
	SEMA3C	Semaphorin 3C; Belongs to the semaphorin family. (750 aa)
	FGF8	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (247 aa)
	SMAD6	Mothers against decapentaplegic homolog. (494 aa)
	BMPR2	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1045 aa)
	NRP2	Neuropilin; Belongs to the neuropilin family. (926 aa)
	LRP2	LDL receptor related protein 2. (4699 aa)
	BMP4	Bone morphogenetic protein 4. (409 aa)
	GATA6	GATA binding protein 6. (482 aa)
	ZFPM2	Zinc finger protein, FOG family member 2. (1151 aa)
	TBX20	T-box transcription factor 20. (446 aa)
	SMAD4	Mothers against decapentaplegic homolog. (552 aa)
	BMPR1A	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (533 aa)
	NKX2-5	NK2 homeobox 5. (323 aa)
	PARVA	Parvin alpha. (372 aa)
	ENG	Endoglin. (653 aa)

Your Current Organism:

Mustela putorius

NCBI taxonomy Id: 9669
Other names: M. putorius furo, Mustela furo, Mustela putorius furo, black ferret, domestic ferret, ferret

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BMP4	BMPR1A	ENSMPUP00000005423	ENSMPUP00000008777	Bone morphogenetic protein 4.	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	0.997
BMP4	BMPR2	ENSMPUP00000005423	ENSMPUP00000000351	Bone morphogenetic protein 4.	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	0.989
BMP4	FGF8	ENSMPUP00000005423	ENSMPUP00000016793	Bone morphogenetic protein 4.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.598
BMP4	GATA6	ENSMPUP00000005423	ENSMPUP00000005576	Bone morphogenetic protein 4.	GATA binding protein 6.	0.600
BMP4	NKX2-5	ENSMPUP00000005423	ENSMPUP00000012613	Bone morphogenetic protein 4.	NK2 homeobox 5.	0.436
BMP4	SMAD4	ENSMPUP00000005423	ENSMPUP00000008705	Bone morphogenetic protein 4.	Mothers against decapentaplegic homolog.	0.892
BMP4	SMAD6	ENSMPUP00000005423	ENSMPUP00000000305	Bone morphogenetic protein 4.	Mothers against decapentaplegic homolog.	0.721
BMPR1A	BMP4	ENSMPUP00000008777	ENSMPUP00000005423	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	Bone morphogenetic protein 4.	0.997
BMPR1A	BMPR2	ENSMPUP00000008777	ENSMPUP00000000351	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	0.969
BMPR1A	SMAD4	ENSMPUP00000008777	ENSMPUP00000008705	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	Mothers against decapentaplegic homolog.	0.842
BMPR1A	SMAD6	ENSMPUP00000008777	ENSMPUP00000000305	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	Mothers against decapentaplegic homolog.	0.826
BMPR2	BMP4	ENSMPUP00000000351	ENSMPUP00000005423	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	Bone morphogenetic protein 4.	0.989
BMPR2	BMPR1A	ENSMPUP00000000351	ENSMPUP00000008777	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	0.969
BMPR2	ENG	ENSMPUP00000000351	ENSMPUP00000013475	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	Endoglin.	0.494
BMPR2	SMAD4	ENSMPUP00000000351	ENSMPUP00000008705	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	Mothers against decapentaplegic homolog.	0.806
BMPR2	SMAD6	ENSMPUP00000000351	ENSMPUP00000000305	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	Mothers against decapentaplegic homolog.	0.768
ENG	BMPR2	ENSMPUP00000013475	ENSMPUP00000000351	Endoglin.	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	0.494
FGF8	BMP4	ENSMPUP00000016793	ENSMPUP00000005423	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Bone morphogenetic protein 4.	0.598
GATA6	BMP4	ENSMPUP00000005576	ENSMPUP00000005423	GATA binding protein 6.	Bone morphogenetic protein 4.	0.600
GATA6	NKX2-5	ENSMPUP00000005576	ENSMPUP00000012613	GATA binding protein 6.	NK2 homeobox 5.	0.775