(8 nodes) Diacylglycerol binding network (Mustela putorius)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	UNC13B	Unc-13 homolog B. (1598 aa)
	FITM1	Fat storage inducing transmembrane protein 1. (292 aa)
	M3YA49_MUSPF	Uncharacterized protein. (659 aa)
	M3YA60_MUSPF	N-terminal Ras-GEF domain-containing protein. (178 aa)
	UNC13A	Unc-13 homolog A. (1731 aa)
	M3Z041_MUSPF	Uncharacterized protein. (1205 aa)
	PLTP	Phospholipid transfer protein. (483 aa)
	FITM2	Fat storage inducing transmembrane protein 2. (294 aa)

Your Current Organism:

Mustela putorius

NCBI taxonomy Id: 9669
Other names: M. putorius furo, Mustela furo, Mustela putorius furo, black ferret, domestic ferret, ferret

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M3YA49_MUSPF	M3YA60_MUSPF	ENSMPUP00000008206	ENSMPUP00000008217	Uncharacterized protein.	N-terminal Ras-GEF domain-containing protein.	0.899
M3YA60_MUSPF	M3YA49_MUSPF	ENSMPUP00000008217	ENSMPUP00000008206	N-terminal Ras-GEF domain-containing protein.	Uncharacterized protein.	0.899
M3Z041_MUSPF	UNC13A	ENSMPUP00000016952	ENSMPUP00000015716	Uncharacterized protein.	Unc-13 homolog A.	0.861
M3Z041_MUSPF	UNC13B	ENSMPUP00000016952	ENSMPUP00000004716	Uncharacterized protein.	Unc-13 homolog B.	0.934
UNC13A	M3Z041_MUSPF	ENSMPUP00000015716	ENSMPUP00000016952	Unc-13 homolog A.	Uncharacterized protein.	0.861
UNC13A	UNC13B	ENSMPUP00000015716	ENSMPUP00000004716	Unc-13 homolog A.	Unc-13 homolog B.	0.861
UNC13B	M3Z041_MUSPF	ENSMPUP00000004716	ENSMPUP00000016952	Unc-13 homolog B.	Uncharacterized protein.	0.934
UNC13B	UNC13A	ENSMPUP00000004716	ENSMPUP00000015716	Unc-13 homolog B.	Unc-13 homolog A.	0.861