STRINGSTRING
M3XLR8_MUSPF M3XLR8_MUSPF RAVER2 RAVER2 RBM8A RBM8A CELF4 CELF4 SON SON SLC39A5 SLC39A5 M3XRE7_MUSPF M3XRE7_MUSPF YTHDC1 YTHDC1 RBMX RBMX KHDRBS3 KHDRBS3 M3XSI8_MUSPF M3XSI8_MUSPF MBNL3 MBNL3 FXR1 FXR1 KHDRBS2 KHDRBS2 MBNL1 MBNL1 DHX36 DHX36 HMX2 HMX2 SRRM4 SRRM4 M3XVG1_MUSPF M3XVG1_MUSPF TRA2B TRA2B RBM4 RBM4 M3XWH0_MUSPF M3XWH0_MUSPF CELF3 CELF3 RBM25 RBM25 CELF5 CELF5 AHCYL1 AHCYL1 SRPK1 SRPK1 RBM15 RBM15 M3XXV9_MUSPF M3XXV9_MUSPF CELF1 CELF1 SMU1 SMU1 SLTM SLTM CDC73 CDC73 ZBTB7A ZBTB7A REST REST M3Y0E3_MUSPF M3Y0E3_MUSPF M3Y0E9_MUSPF M3Y0E9_MUSPF WTAP WTAP NOVA2 NOVA2 NOVA1 NOVA1 SF3B4 SF3B4 SAFB2 SAFB2 SAFB SAFB RBM42 RBM42 QKI QKI NCBP1 NCBP1 RBM38 RBM38 HSF1 HSF1 M3Y5Q7_MUSPF M3Y5Q7_MUSPF U2AF2 U2AF2 RBM23 RBM23 TIA1 TIA1 ZFP36L1 ZFP36L1 LEO1 LEO1 PUF60 PUF60 DAZAP1 DAZAP1 ZC3H14 ZC3H14 M3YAB1_MUSPF M3YAB1_MUSPF ZC3H3 ZC3H3 M3YAN4_MUSPF M3YAN4_MUSPF DYRK1A DYRK1A SNW1 SNW1 SRPK3 SRPK3 VIRMA VIRMA FXR2 FXR2 M3YCX9_MUSPF M3YCX9_MUSPF SRSF12 SRSF12 PTBP1 PTBP1 NUP98 NUP98 M3YG97_MUSPF M3YG97_MUSPF RBM11 RBM11 C1QBP C1QBP FMR1 FMR1 DHX9 DHX9 M3YJJ7_MUSPF M3YJJ7_MUSPF MBNL2 MBNL2 PCBP4 PCBP4 PRR3 PRR3 EIF4A3 EIF4A3 RBFOX3 RBFOX3 RBFOX2 RBFOX2 SF1 SF1 DDX17 DDX17 RBM10 RBM10 JMJD6 JMJD6 TRA2A TRA2A MYOD1 MYOD1 CDK9 CDK9 NSRP1 NSRP1 CPSF7 CPSF7 SUPT6H SUPT6H SRSF3 SRSF3 PTCD2 PTCD2 PRPF19 PRPF19 M3YT25_MUSPF M3YT25_MUSPF THRAP3 THRAP3 RBFOX1 RBFOX1 KHDRBS1 KHDRBS1 SRSF4 SRSF4 HNRNPU HNRNPU M3YWL2_MUSPF M3YWL2_MUSPF M3YWL3_MUSPF M3YWL3_MUSPF CELF2 CELF2 IWS1 IWS1 M3Z0D3_MUSPF M3Z0D3_MUSPF CPSF6 CPSF6 SRSF6 SRSF6 PAF1 PAF1 RBM39 RBM39 M3Z2X9_MUSPF M3Z2X9_MUSPF SRPK2 SRPK2 NCBP2L NCBP2L ZC3H10 ZC3H10 M3Z6E6_MUSPF M3Z6E6_MUSPF RBM15B RBM15B M3Z7V2_MUSPF M3Z7V2_MUSPF
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
M3XLR8_MUSPFPWI domain-containing protein. (465 aa)
RAVER2Ribonucleoprotein, PTB binding 2. (630 aa)
RBM8ARNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (174 aa)
CELF4CUGBP Elav-like family member 4. (415 aa)
SONSON DNA binding protein. (2465 aa)
SLC39A5Solute carrier family 39 member 5. (542 aa)
M3XRE7_MUSPFUncharacterized protein. (479 aa)
YTHDC1YTH domain containing 1. (718 aa)
RBMXRNA binding motif protein, X-linked. (392 aa)
KHDRBS3KH RNA binding domain containing, signal transduction associated 3. (325 aa)
M3XSI8_MUSPFUncharacterized protein. (463 aa)
MBNL3Muscleblind like splicing regulator 3. (369 aa)
FXR1FMR1 autosomal homolog 1. (648 aa)
KHDRBS2KH RNA binding domain containing, signal transduction associated 2. (349 aa)
MBNL1Muscleblind like splicing regulator 1. (418 aa)
DHX36DEAH-box helicase 36. (1013 aa)
HMX2H6 family homeobox 2. (272 aa)
SRRM4Serine/arginine repetitive matrix 4. (603 aa)
M3XVG1_MUSPFHelicase C-terminal domain-containing protein. (106 aa)
TRA2BTransformer 2 beta homolog. (288 aa)
RBM4RNA binding motif protein 4. (365 aa)
M3XWH0_MUSPFCleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (227 aa)
CELF3CUGBP Elav-like family member 3. (541 aa)
RBM25RNA binding motif protein 25. (748 aa)
CELF5CUGBP Elav-like family member 5. (398 aa)
AHCYL1Adenosylhomocysteinase like 1; Belongs to the adenosylhomocysteinase family. (530 aa)
SRPK1SRSF protein kinase 1. (655 aa)
RBM15RNA binding motif protein 15. (970 aa)
M3XXV9_MUSPFRRM domain-containing protein. (263 aa)
CELF1CUGBP Elav-like family member 1. (550 aa)
SMU1SMU1 DNA replication regulator and spliceosomal factor. (513 aa)
SLTMSAFB like transcription modulator. (1034 aa)
CDC73Cell division cycle 73. (531 aa)
ZBTB7AZinc finger and BTB domain containing 7A. (550 aa)
RESTRE1 silencing transcription factor. (1098 aa)
M3Y0E3_MUSPFRRM domain-containing protein. (114 aa)
M3Y0E9_MUSPFUncharacterized protein. (139 aa)
WTAPWT1 associated protein. (396 aa)
NOVA2NOVA alternative splicing regulator 2. (338 aa)
NOVA1NOVA alternative splicing regulator 1. (507 aa)
SF3B4Splicing factor 3b subunit 4. (424 aa)
SAFB2Scaffold attachment factor B2. (1029 aa)
SAFBScaffold attachment factor B. (976 aa)
RBM42RNA binding motif protein 42. (448 aa)
QKIQKI, KH domain containing RNA binding. (286 aa)
NCBP1Nuclear cap binding protein subunit 1. (790 aa)
RBM38RNA binding motif protein 38. (202 aa)
HSF1Heat shock transcription factor 1. (555 aa)
M3Y5Q7_MUSPFUncharacterized protein. (758 aa)
U2AF2U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (471 aa)
RBM23RNA binding motif protein 23. (444 aa)
TIA1TIA1 cytotoxic granule associated RNA binding protein. (395 aa)
ZFP36L1ZFP36 ring finger protein like 1. (317 aa)
LEO1LEO1 homolog, Paf1/RNA polymerase II complex component. (664 aa)
PUF60Poly(U) binding splicing factor 60. (565 aa)
DAZAP1DAZ associated protein 1. (453 aa)
ZC3H14Zinc finger CCCH-type containing 14. (717 aa)
M3YAB1_MUSPFUncharacterized protein. (578 aa)
ZC3H3Zinc finger CCCH-type containing 3. (882 aa)
M3YAN4_MUSPFRRM domain-containing protein. (169 aa)
DYRK1ADual specificity tyrosine phosphorylation regulated kinase 1A. (754 aa)
SNW1SNW domain containing 1. (536 aa)
SRPK3SRSF protein kinase 3. (524 aa)
VIRMAVir like m6A methyltransferase associated. (1812 aa)
FXR2FMR1 autosomal homolog 2. (703 aa)
M3YCX9_MUSPFUncharacterized protein; Belongs to the DEAD box helicase family. (671 aa)
SRSF12Serine and arginine rich splicing factor 12. (166 aa)
PTBP1Polypyrimidine tract binding protein 1. (557 aa)
NUP98Nucleoporin 98. (1801 aa)
M3YG97_MUSPFRRM domain-containing protein. (276 aa)
RBM11RNA binding motif protein 11. (231 aa)
C1QBPComplement C1q binding protein. (272 aa)
FMR1Fragile X mental retardation 1. (615 aa)
DHX9DExH-box helicase 9. (1200 aa)
M3YJJ7_MUSPFUncharacterized protein. (402 aa)
MBNL2Muscleblind like splicing regulator 2. (361 aa)
PCBP4Poly(rC) binding protein 4. (403 aa)
PRR3Proline rich 3. (209 aa)
EIF4A3Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. (422 aa)
RBFOX3RNA binding protein fox-1 homolog 3; RNA-binding protein that regulates alternative splicing events. (383 aa)
RBFOX2RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events. (403 aa)
SF1Splicing factor 1. (639 aa)
DDX17DEAD-box helicase 17; Belongs to the DEAD box helicase family. (650 aa)
RBM10RNA binding motif protein 10. (1060 aa)
JMJD6Jumonji domain containing 6, arginine demethylase and lysine hydroxylase. (414 aa)
TRA2ATransformer 2 alpha homolog. (281 aa)
MYOD1Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation. (319 aa)
CDK9Cyclin dependent kinase 9; Belongs to the protein kinase superfamily. (372 aa)
NSRP1Nuclear speckle splicing regulatory protein 1. (520 aa)
CPSF7Cleavage and polyadenylation specific factor 7. (477 aa)
SUPT6HTranscription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1726 aa)
SRSF3Serine and arginine rich splicing factor 3. (170 aa)
PTCD2Pentatricopeptide repeat domain 2. (383 aa)
PRPF19Pre-mRNA processing factor 19. (504 aa)
M3YT25_MUSPFUncharacterized protein; Belongs to the DEAD box helicase family. (372 aa)
THRAP3Thyroid hormone receptor associated protein 3. (957 aa)
RBFOX1RNA binding protein fox-1 homolog 1; RNA-binding protein that regulates alternative splicing events. (394 aa)
KHDRBS1KH RNA binding domain containing, signal transduction associated 1. (443 aa)
SRSF4Serine and arginine rich splicing factor 4. (502 aa)
HNRNPUHeterogeneous nuclear ribonucleoprotein U. (592 aa)
M3YWL2_MUSPFUncharacterized protein. (578 aa)
M3YWL3_MUSPFPWI domain-containing protein. (213 aa)
CELF2CUGBP Elav-like family member 2. (508 aa)
IWS1Interacts with SUPT6H, CTD assembly factor 1. (846 aa)
M3Z0D3_MUSPFUncharacterized protein. (453 aa)
CPSF6Cleavage and polyadenylation specific factor 6. (539 aa)
SRSF6Serine and arginine rich splicing factor 6. (288 aa)
PAF1PAF1 homolog, Paf1/RNA polymerase II complex component. (554 aa)
RBM39RNA binding motif protein 39. (530 aa)
M3Z2X9_MUSPFUncharacterized protein. (513 aa)
SRPK2SRSF protein kinase 2. (686 aa)
NCBP2LNuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (156 aa)
ZC3H10Zinc finger CCCH-type containing 10. (435 aa)
M3Z6E6_MUSPFUncharacterized protein. (134 aa)
RBM15BRNA binding motif protein 15B. (636 aa)
M3Z7V2_MUSPFCleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (227 aa)
Your Current Organism:
Mustela putorius
NCBI taxonomy Id: 9669
Other names: M. putorius furo, Mustela furo, Mustela putorius furo, black ferret, domestic ferret, ferret
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