STRINGSTRING
RAB34 RAB34 CLN3 CLN3 RAB7B RAB7B TMEM175 TMEM175 RAB36 RAB36 RAB39A RAB39A RAB20 RAB20 SPG11 SPG11 PIKFYVE PIKFYVE RAB7A RAB7A
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RAB34RAB34, member RAS oncogene family. (259 aa)
CLN3Battenin. (438 aa)
RAB7BRAB7B, member RAS oncogene family. (200 aa)
TMEM175Transmembrane protein 175. (498 aa)
RAB36RAB36, member RAS oncogene family. (358 aa)
RAB39ARAB39A, member RAS oncogene family. (176 aa)
RAB20RAB20, member RAS oncogene family. (231 aa)
SPG11SPG11 vesicle trafficking associated, spatacsin. (2444 aa)
PIKFYVEPhosphoinositide kinase, FYVE-type zinc finger containing. (2099 aa)
RAB7ARAB7A, member RAS oncogene family. (207 aa)
Your Current Organism:
Mustela putorius
NCBI taxonomy Id: 9669
Other names: M. putorius furo, Mustela furo, Mustela putorius furo, black ferret, domestic ferret, ferret
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