(5 nodes) scaRNA localization to Cajal body network (Mustela putorius)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DKC1	Dyskerin pseudouridine synthase 1. (539 aa)
	CCT4	T-complex protein 1 subunit delta. (539 aa)
	TCP1	T-complex 1. (556 aa)
	CCT2	Chaperonin containing TCP1 subunit 2. (535 aa)
	WRAP53	WD repeat containing antisense to TP53. (539 aa)

Your Current Organism:

Mustela putorius

NCBI taxonomy Id: 9669
Other names: M. putorius furo, Mustela furo, Mustela putorius furo, black ferret, domestic ferret, ferret

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCT2	CCT4	ENSMPUP00000017388	ENSMPUP00000005570	Chaperonin containing TCP1 subunit 2.	T-complex protein 1 subunit delta.	0.999
CCT2	TCP1	ENSMPUP00000017388	ENSMPUP00000004981	Chaperonin containing TCP1 subunit 2.	T-complex 1.	0.999
CCT4	CCT2	ENSMPUP00000005570	ENSMPUP00000017388	T-complex protein 1 subunit delta.	Chaperonin containing TCP1 subunit 2.	0.999
CCT4	TCP1	ENSMPUP00000005570	ENSMPUP00000004981	T-complex protein 1 subunit delta.	T-complex 1.	0.999
DKC1	WRAP53	ENSMPUP00000016029	ENSMPUP00000008941	Dyskerin pseudouridine synthase 1.	WD repeat containing antisense to TP53.	0.995
TCP1	CCT2	ENSMPUP00000004981	ENSMPUP00000017388	T-complex 1.	Chaperonin containing TCP1 subunit 2.	0.999
TCP1	CCT4	ENSMPUP00000004981	ENSMPUP00000005570	T-complex 1.	T-complex protein 1 subunit delta.	0.999
TCP1	WRAP53	ENSMPUP00000004981	ENSMPUP00000008941	T-complex 1.	WD repeat containing antisense to TP53.	0.423
WRAP53	DKC1	ENSMPUP00000008941	ENSMPUP00000016029	WD repeat containing antisense to TP53.	Dyskerin pseudouridine synthase 1.	0.995
WRAP53	TCP1	ENSMPUP00000008941	ENSMPUP00000004981	WD repeat containing antisense to TP53.	T-complex 1.	0.423