(6 nodes) Sulfatide binding network (Mustela putorius)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TREML1	Triggering receptor expressed on myeloid cells like 1. (314 aa)
	TREM2	Triggering receptor expressed on myeloid cells 2. (230 aa)
	CLN3	Battenin. (438 aa)
	MANF	Mesencephalic astrocyte derived neurotrophic factor. (179 aa)
	TPP1	Tripeptidyl peptidase 1. (572 aa)
	CLN6	CLN6 transmembrane ER protein. (304 aa)

Your Current Organism:

Mustela putorius

NCBI taxonomy Id: 9669
Other names: M. putorius furo, Mustela furo, Mustela putorius furo, black ferret, domestic ferret, ferret

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CLN3	CLN6	ENSMPUP00000012633	ENSMPUP00000000265	Battenin.	CLN6 transmembrane ER protein.	0.853
CLN3	TPP1	ENSMPUP00000012633	ENSMPUP00000005439	Battenin.	Tripeptidyl peptidase 1.	0.740
CLN6	CLN3	ENSMPUP00000000265	ENSMPUP00000012633	CLN6 transmembrane ER protein.	Battenin.	0.853
CLN6	TPP1	ENSMPUP00000000265	ENSMPUP00000005439	CLN6 transmembrane ER protein.	Tripeptidyl peptidase 1.	0.743
TPP1	CLN3	ENSMPUP00000005439	ENSMPUP00000012633	Tripeptidyl peptidase 1.	Battenin.	0.740
TPP1	CLN6	ENSMPUP00000005439	ENSMPUP00000000265	Tripeptidyl peptidase 1.	CLN6 transmembrane ER protein.	0.743
TREM2	TREML1	ENSMPUP00000013551	ENSMPUP00000013574	Triggering receptor expressed on myeloid cells 2.	Triggering receptor expressed on myeloid cells like 1.	0.704
TREML1	TREM2	ENSMPUP00000013574	ENSMPUP00000013551	Triggering receptor expressed on myeloid cells like 1.	Triggering receptor expressed on myeloid cells 2.	0.704