(13 nodes) Chaperonin TCP-1, conserved site network (Mustela putorius)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	M3Z5Y4_MUSPF	T-complex protein 1 subunit gamma; Belongs to the TCP-1 chaperonin family. (340 aa)
	CCT2	Chaperonin containing TCP1 subunit 2. (535 aa)
	M3YXP6_MUSPF	Uncharacterized protein. (545 aa)
	CCT6B	Chaperonin containing TCP1 subunit 6B. (566 aa)
	CCT5	Chaperonin containing TCP1 subunit 5. (541 aa)
	M3Y9R5_MUSPF	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin. (475 aa)
	TCP1	T-complex 1. (556 aa)
	CCT4	T-complex protein 1 subunit delta. (539 aa)
	M3Y8B3_MUSPF	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin. (543 aa)
	CCT8	Chaperonin containing TCP1 subunit 8. (553 aa)
	M3XQH3_MUSPF	Uncharacterized protein. (522 aa)
	M3XZ67_MUSPF	Uncharacterized protein; Belongs to the TCP-1 chaperonin family. (482 aa)
	M3Z7H0_MUSPF	T-complex protein 1 subunit gamma. (497 aa)

Your Current Organism:

Mustela putorius

NCBI taxonomy Id: 9669
Other names: M. putorius furo, Mustela furo, Mustela putorius furo, black ferret, domestic ferret, ferret

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCT2	CCT4	ENSMPUP00000017388	ENSMPUP00000005570	Chaperonin containing TCP1 subunit 2.	T-complex protein 1 subunit delta.	0.999
CCT2	CCT5	ENSMPUP00000017388	ENSMPUP00000011165	Chaperonin containing TCP1 subunit 2.	Chaperonin containing TCP1 subunit 5.	0.999
CCT2	CCT6B	ENSMPUP00000017388	ENSMPUP00000014745	Chaperonin containing TCP1 subunit 2.	Chaperonin containing TCP1 subunit 6B.	0.988
CCT2	CCT8	ENSMPUP00000017388	ENSMPUP00000001036	Chaperonin containing TCP1 subunit 2.	Chaperonin containing TCP1 subunit 8.	0.999
CCT2	M3XQH3_MUSPF	ENSMPUP00000017388	ENSMPUP00000001323	Chaperonin containing TCP1 subunit 2.	Uncharacterized protein.	0.988
CCT2	M3XZ67_MUSPF	ENSMPUP00000017388	ENSMPUP00000004368	Chaperonin containing TCP1 subunit 2.	Uncharacterized protein; Belongs to the TCP-1 chaperonin family.	0.992
CCT2	M3Y8B3_MUSPF	ENSMPUP00000017388	ENSMPUP00000007570	Chaperonin containing TCP1 subunit 2.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.997
CCT2	M3Y9R5_MUSPF	ENSMPUP00000017388	ENSMPUP00000008072	Chaperonin containing TCP1 subunit 2.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.997
CCT2	M3YXP6_MUSPF	ENSMPUP00000017388	ENSMPUP00000016106	Chaperonin containing TCP1 subunit 2.	Uncharacterized protein.	0.988
CCT2	M3Z5Y4_MUSPF	ENSMPUP00000017388	ENSMPUP00000018996	Chaperonin containing TCP1 subunit 2.	T-complex protein 1 subunit gamma; Belongs to the TCP-1 chaperonin family.	0.992
CCT2	M3Z7H0_MUSPF	ENSMPUP00000017388	ENSMPUP00000019533	Chaperonin containing TCP1 subunit 2.	T-complex protein 1 subunit gamma.	0.992
CCT2	TCP1	ENSMPUP00000017388	ENSMPUP00000004981	Chaperonin containing TCP1 subunit 2.	T-complex 1.	0.999
CCT4	CCT2	ENSMPUP00000005570	ENSMPUP00000017388	T-complex protein 1 subunit delta.	Chaperonin containing TCP1 subunit 2.	0.999
CCT4	CCT5	ENSMPUP00000005570	ENSMPUP00000011165	T-complex protein 1 subunit delta.	Chaperonin containing TCP1 subunit 5.	0.999
CCT4	CCT6B	ENSMPUP00000005570	ENSMPUP00000014745	T-complex protein 1 subunit delta.	Chaperonin containing TCP1 subunit 6B.	0.980
CCT4	CCT8	ENSMPUP00000005570	ENSMPUP00000001036	T-complex protein 1 subunit delta.	Chaperonin containing TCP1 subunit 8.	0.999
CCT4	M3XQH3_MUSPF	ENSMPUP00000005570	ENSMPUP00000001323	T-complex protein 1 subunit delta.	Uncharacterized protein.	0.980
CCT4	M3XZ67_MUSPF	ENSMPUP00000005570	ENSMPUP00000004368	T-complex protein 1 subunit delta.	Uncharacterized protein; Belongs to the TCP-1 chaperonin family.	0.989
CCT4	M3Y8B3_MUSPF	ENSMPUP00000005570	ENSMPUP00000007570	T-complex protein 1 subunit delta.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.998
CCT4	M3Y9R5_MUSPF	ENSMPUP00000005570	ENSMPUP00000008072	T-complex protein 1 subunit delta.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.998