(23 nodes) Hemopexin-like domain superfamily network (Mustela putorius)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MMP16	Matrix metallopeptidase 16. (562 aa)
	MMP24	Matrix metallopeptidase 24. (574 aa)
	MMP9	Matrix metallopeptidase 9. (704 aa)
	MMP25	Matrix metallopeptidase 25. (615 aa)
	MMP28	Matrix metallopeptidase 28. (520 aa)
	VTN	SMB domain-containing protein. (470 aa)
	PRG4	Proteoglycan 4. (1107 aa)
	MMP19	Matrix metallopeptidase 19. (551 aa)
	MMP14	Matrix metallopeptidase 14. (582 aa)
	MMP20	Matrix metallopeptidase 20. (417 aa)
	MMP27	Matrix metallopeptidase 27. (510 aa)
	MMP8	Matrix metallopeptidase 8. (473 aa)
	M3Y672_MUSPF	Uncharacterized protein. (100 aa)
	MMP1	Matrix metallopeptidase 1. (470 aa)
	LOC101688701	ZnMc domain-containing protein. (476 aa)
	MMP12	Matrix metallopeptidase 12. (493 aa)
	MMP13	Matrix metallopeptidase 13. (511 aa)
	HPX	Hemopexin. (463 aa)
	MMP15	Matrix metallopeptidase 15. (674 aa)
	MMP2	Matrix metallopeptidase 2. (661 aa)
	MMP11	Matrix metallopeptidase 11. (489 aa)
	MMP21	Matrix metallopeptidase 21. (404 aa)
	MMP17	Matrix metallopeptidase 17. (552 aa)

Your Current Organism:

Mustela putorius

NCBI taxonomy Id: 9669
Other names: M. putorius furo, Mustela furo, Mustela putorius furo, black ferret, domestic ferret, ferret

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HPX	MMP14	ENSMPUP00000005670	ENSMPUP00000007154	Hemopexin.	Matrix metallopeptidase 14.	0.518
HPX	MMP9	ENSMPUP00000005670	ENSMPUP00000017496	Hemopexin.	Matrix metallopeptidase 9.	0.422
HPX	VTN	ENSMPUP00000005670	ENSMPUP00000014197	Hemopexin.	SMB domain-containing protein.	0.518
LOC101688701	MMP1	ENSMPUP00000006809	ENSMPUP00000006816	ZnMc domain-containing protein.	Matrix metallopeptidase 1.	0.905
LOC101688701	MMP11	ENSMPUP00000006809	ENSMPUP00000002988	ZnMc domain-containing protein.	Matrix metallopeptidase 11.	0.403
LOC101688701	MMP13	ENSMPUP00000006809	ENSMPUP00000006786	ZnMc domain-containing protein.	Matrix metallopeptidase 13.	0.489
LOC101688701	MMP14	ENSMPUP00000006809	ENSMPUP00000007154	ZnMc domain-containing protein.	Matrix metallopeptidase 14.	0.479
LOC101688701	MMP20	ENSMPUP00000006809	ENSMPUP00000007096	ZnMc domain-containing protein.	Matrix metallopeptidase 20.	0.474
LOC101688701	MMP8	ENSMPUP00000006809	ENSMPUP00000006829	ZnMc domain-containing protein.	Matrix metallopeptidase 8.	0.499
LOC101688701	MMP9	ENSMPUP00000006809	ENSMPUP00000017496	ZnMc domain-containing protein.	Matrix metallopeptidase 9.	0.872
M3Y672_MUSPF	MMP1	ENSMPUP00000006823	ENSMPUP00000006816	Uncharacterized protein.	Matrix metallopeptidase 1.	0.903
M3Y672_MUSPF	MMP13	ENSMPUP00000006823	ENSMPUP00000006786	Uncharacterized protein.	Matrix metallopeptidase 13.	0.472
M3Y672_MUSPF	MMP14	ENSMPUP00000006823	ENSMPUP00000007154	Uncharacterized protein.	Matrix metallopeptidase 14.	0.434
M3Y672_MUSPF	MMP8	ENSMPUP00000006823	ENSMPUP00000006829	Uncharacterized protein.	Matrix metallopeptidase 8.	0.483
M3Y672_MUSPF	MMP9	ENSMPUP00000006823	ENSMPUP00000017496	Uncharacterized protein.	Matrix metallopeptidase 9.	0.872
MMP1	LOC101688701	ENSMPUP00000006816	ENSMPUP00000006809	Matrix metallopeptidase 1.	ZnMc domain-containing protein.	0.905
MMP1	M3Y672_MUSPF	ENSMPUP00000006816	ENSMPUP00000006823	Matrix metallopeptidase 1.	Uncharacterized protein.	0.903
MMP1	MMP11	ENSMPUP00000006816	ENSMPUP00000002988	Matrix metallopeptidase 1.	Matrix metallopeptidase 11.	0.507
MMP1	MMP12	ENSMPUP00000006816	ENSMPUP00000006794	Matrix metallopeptidase 1.	Matrix metallopeptidase 12.	0.880
MMP1	MMP13	ENSMPUP00000006816	ENSMPUP00000006786	Matrix metallopeptidase 1.	Matrix metallopeptidase 13.	0.501