STRINGSTRING
Tchl_0094 Tchl_0094 Tchl_0609 Tchl_0609 Tchl_1060 Tchl_1060 Tchl_1061 Tchl_1061 Tchl_1062 Tchl_1062 Tchl_1063 Tchl_1063 Tchl_1101 Tchl_1101 Tchl_1107 Tchl_1107 Tchl_1486 Tchl_1486 Tchl_1563 Tchl_1563 Tchl_1595 Tchl_1595 Tchl_1894 Tchl_1894 ubiX ubiX Tchl_2357 Tchl_2357 Tchl_2358 Tchl_2358 Tchl_2359 Tchl_2359 Tchl_2972 Tchl_2972 Tchl_2973 Tchl_2973 Tchl_3080 Tchl_3080 ubiX-2 ubiX-2 Tchl_3118 Tchl_3118 Tchl_3188 Tchl_3188 Tchl_3189 Tchl_3189
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tchl_0094FMN-dependent dehydrogenase. (376 aa)
Tchl_0609enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (258 aa)
Tchl_10602-pyrone-4,6-dicarboxylic acid hydrolase PmdD. (304 aa)
Tchl_1061Protocatechuate 4,5-dioxygenase alpha chain PmdA. (147 aa)
Tchl_1062Protocatechuate 4,5-dioxygenase beta chain PmdB. (284 aa)
Tchl_10634-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase PmdC. (319 aa)
Tchl_1101benzoate-CoA ligase. (527 aa)
Tchl_1107benzoate-CoA ligase. (532 aa)
Tchl_1486Mandelate dehydrogenase. (407 aa)
Tchl_1563Putative benzaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (487 aa)
Tchl_1595Vanillin dehydrogenase; Belongs to the aldehyde dehydrogenase family. (483 aa)
Tchl_18942-amninobenzoyl-CoA monooxygenase/reductase. (770 aa)
ubiXFlavin prenyltransferase UbiX; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (196 aa)
Tchl_23574-hydroxybenzoyl-CoA reductase, beta subunit. (324 aa)
Tchl_23584-hydroxybenzoyl-CoA reductase, alpha subunit. (769 aa)
Tchl_23594-hydroxybenzoyl-CoA reductase, gamma subunit. (161 aa)
Tchl_29723-hydroxy-benzoate-CoA ligase. (522 aa)
Tchl_2973enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (256 aa)
Tchl_3080phthaloyl-CoA decarboxylase; Belongs to the UbiD family. (527 aa)
ubiX-2FMN prenyltransferase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (195 aa)
Tchl_3118Benzoylformate decarboxylase; Belongs to the TPP enzyme family. (556 aa)
Tchl_3188Vanillate O-demethylase oxygenase subunit VanA. (349 aa)
Tchl_3189Vanillate O-demethylase oxidoreductase VanB. (321 aa)
Your Current Organism:
Thauera chlorobenzoica
NCBI taxonomy Id: 96773
Other names: ATCC 700723, CIP 107679, DSM 18012, KCTC 12933, T. chlorobenzoica, Thauera aromatica genomovar chlorobenzoica, Thauera chlorobenzoica Song et al. 2001, strain 3CB-1
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