STRINGSTRING
SCAF4 SCAF4 INTS3 INTS3 ZNF827 ZNF827 INTS13 INTS13 DXO DXO CPSF4L CPSF4L BCAM BCAM ZC3H4 ZC3H4 INTS8 INTS8 SYMPK SYMPK INTS1 INTS1 CPSF3 CPSF3 XRN2 XRN2 ZC3H8 ZC3H8 ZC3H6 ZC3H6 NUDT21 NUDT21 WDR33 WDR33 INTS7 INTS7 RCC2 RCC2 DCLRE1A DCLRE1A NABP2 NABP2 RPAP1 RPAP1 GPN2 GPN2 CPSF7 CPSF7 TONSL TONSL MYZAP MYZAP CSTF3 CSTF3 TMTC3 TMTC3 FIP1L1 FIP1L1 INTS12 INTS12 INTS6 INTS6 INTS5 INTS5 RPAP2 RPAP2 MTDH MTDH INTS2 INTS2 NABP1 NABP1 ICE2 ICE2 WDR82 WDR82 RPRD1B RPRD1B CSTF1 CSTF1 PCF11 PCF11 M3XBZ4_FELCA M3XBZ4_FELCA INTS4 INTS4 DPY19L4 DPY19L4 SLX4IP SLX4IP INTS14 INTS14 GLYR1 GLYR1 SSU72 SSU72 RPRD2 RPRD2 ICE1 ICE1 CLP1 CLP1 CPSF6 CPSF6 DCLRE1B DCLRE1B SETX SETX PAPOLA PAPOLA PAPOLG PAPOLG CPSF2 CPSF2 RAD54L2 RAD54L2 INTS10 INTS10 INTS9 INTS9 INIP INIP CPSF4 CPSF4 LOC111558941 LOC111558941 FNDC10 FNDC10 CYHR1 CYHR1 RPRD1A RPRD1A RBBP6 RBBP6 POLR2M POLR2M GPN1 GPN1 GPN3 GPN3 INTS11 INTS11 MMS22L MMS22L CSTF2T CSTF2T ENSFCAP00000052808 ENSFCAP00000052808 KIAA1614 KIAA1614 ZC3H3 ZC3H3 CSTF2 CSTF2 CPSF1 CPSF1 PAPOLB PAPOLB ENSFCAP00000058025 ENSFCAP00000058025 UBE3D UBE3D
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SCAF4SR-related CTD associated factor 4. (1393 aa)
INTS3Integrator complex subunit 3. (1012 aa)
ZNF827Zinc finger protein 827. (1082 aa)
INTS13Integrator complex subunit 13. (706 aa)
DXODecapping exoribonuclease. (397 aa)
CPSF4LCleavage and polyadenylation specific factor 4 like. (216 aa)
BCAMBasal cell adhesion molecule (Lutheran blood group). (628 aa)
ZC3H4Zinc finger CCCH-type containing 4. (1274 aa)
INTS8Integrator complex subunit 8. (995 aa)
SYMPKSymplekin. (1357 aa)
INTS1Integrator complex subunit 1. (2186 aa)
CPSF3Cleavage and polyadenylation specific factor 3. (684 aa)
XRN25'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (950 aa)
ZC3H8Zinc finger CCCH-type containing 8. (311 aa)
ZC3H6Zinc finger CCCH-type containing 6. (1169 aa)
NUDT21Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (227 aa)
WDR33WD repeat domain 33. (1330 aa)
INTS7Integrator complex subunit 7. (962 aa)
RCC2Regulator of chromosome condensation 2. (522 aa)
DCLRE1ADNA cross-link repair 1A. (1049 aa)
NABP2Nucleic acid binding protein 2. (211 aa)
RPAP1RNA polymerase II associated protein 1. (1394 aa)
GPN2GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. (310 aa)
CPSF7Cleavage and polyadenylation specific factor 7. (531 aa)
TONSLTonsoku like, DNA repair protein. (1370 aa)
MYZAPUncharacterized protein. (463 aa)
CSTF3Cleavage stimulation factor subunit 3. (717 aa)
TMTC3Transmembrane O-mannosyltransferase targeting cadherins 3. (915 aa)
FIP1L1Factor interacting with PAPOLA and CPSF1. (603 aa)
INTS12Integrator complex subunit 12. (462 aa)
INTS6Integrator complex subunit 6. (887 aa)
INTS5Integrator complex subunit 5. (1019 aa)
RPAP2RNA polymerase II associated protein 2. (615 aa)
MTDHMetadherin. (612 aa)
INTS2Integrator complex subunit 2. (1203 aa)
NABP1Nucleic acid binding protein 1. (219 aa)
ICE2Interactor of little elongation complex ELL subunit 2. (994 aa)
WDR82WD repeat domain 82. (313 aa)
RPRD1BRegulation of nuclear pre-mRNA domain containing 1B. (326 aa)
CSTF1Cleavage stimulation factor subunit 1. (431 aa)
PCF11PCF11 cleavage and polyadenylation factor subunit. (1686 aa)
M3XBZ4_FELCAUncharacterized protein. (194 aa)
INTS4Integrator complex subunit 4. (964 aa)
DPY19L4Dpy-19 like 4. (723 aa)
SLX4IPSLX4 interacting protein. (406 aa)
INTS14Integrator complex subunit 14. (518 aa)
GLYR1Glyoxylate reductase 1 homolog. (553 aa)
SSU72Uncharacterized protein. (194 aa)
RPRD2Regulation of nuclear pre-mRNA domain containing 2. (1462 aa)
ICE1Interactor of little elongation complex ELL subunit 1. (2296 aa)
CLP1Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...] (634 aa)
CPSF6Cleavage and polyadenylation specific factor 6. (588 aa)
DCLRE1BDNA cross-link repair 1B. (541 aa)
SETXSenataxin. (2669 aa)
PAPOLAPoly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (739 aa)
PAPOLGPoly(A) polymerase gamma. (777 aa)
CPSF2Cleavage and polyadenylation specificity factor subunit 2. (782 aa)
RAD54L2RAD54 like 2. (1467 aa)
INTS10Integrator complex subunit 10. (769 aa)
INTS9Integrator complex subunit 9. (683 aa)
INIPINTS3 and NABP interacting protein. (104 aa)
CPSF4Cleavage and polyadenylation specific factor 4. (269 aa)
LOC111558941Uncharacterized protein. (291 aa)
FNDC10Fibronectin type III domain containing 10. (229 aa)
CYHR1Cysteine and histidine rich 1. (406 aa)
RPRD1ARegulation of nuclear pre-mRNA domain containing 1A. (359 aa)
RBBP6RB binding protein 6, ubiquitin ligase. (1792 aa)
POLR2MRNA polymerase II subunit M. (366 aa)
GPN1GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import. (388 aa)
GPN3GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. (342 aa)
INTS11Integrator complex subunit 11. (608 aa)
MMS22LMMS22 like, DNA repair protein. (1241 aa)
CSTF2TCleavage stimulation factor subunit 2 tau variant. (663 aa)
ENSFCAP00000052808Uncharacterized protein. (196 aa)
KIAA1614KIAA1614. (1203 aa)
ZC3H3Zinc finger CCCH-type containing 3. (1016 aa)
CSTF2Cleavage stimulation factor subunit 2. (626 aa)
CPSF1Cleavage and polyadenylation specific factor 1. (1482 aa)
PAPOLBPoly(A) polymerase beta. (703 aa)
ENSFCAP00000058025Uncharacterized protein. (91 aa)
UBE3DUbiquitin protein ligase E3D. (436 aa)
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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