(17 nodes) Cytosolic large ribosomal subunit network (Felis catus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RPL24	60S ribosomal protein L24; Belongs to the eukaryotic ribosomal protein eL24 family. (157 aa)
	RPL3	Ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (403 aa)
	RPL6	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (288 aa)
	RPL18	Ribosomal_L18e/L15P domain-containing protein. (188 aa)
	RPL13A	Ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family. (203 aa)
	RPL26	Ribosomal protein L26. (145 aa)
	RPL9	Ribosomal protein L9. (192 aa)
	RPL27	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (136 aa)
	RPL23	Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. (140 aa)
	RPL34	Ribosomal protein L34. (117 aa)
	RPL14	Ribosomal_L14e domain-containing protein. (327 aa)
	M3WZH2_FELCA	Uncharacterized protein. (128 aa)
	RPL19	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (227 aa)
	RPL15	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)
	RPL7	Uncharacterized protein. (252 aa)
	RPL7A	Ribosomal protein L7a. (266 aa)
	RPL13	Uncharacterized protein. (320 aa)

Your Current Organism:

Felis catus

NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M3WZH2_FELCA	RPL13	ENSFCAP00000019763	ENSFCAP00000062065	Uncharacterized protein.	Uncharacterized protein.	0.998
M3WZH2_FELCA	RPL13A	ENSFCAP00000019763	ENSFCAP00000008520	Uncharacterized protein.	Ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family.	0.997
M3WZH2_FELCA	RPL14	ENSFCAP00000019763	ENSFCAP00000014518	Uncharacterized protein.	Ribosomal_L14e domain-containing protein.	0.994
M3WZH2_FELCA	RPL15	ENSFCAP00000019763	ENSFCAP00000032721	Uncharacterized protein.	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	0.996
M3WZH2_FELCA	RPL18	ENSFCAP00000019763	ENSFCAP00000008019	Uncharacterized protein.	Ribosomal_L18e/L15P domain-containing protein.	0.994
M3WZH2_FELCA	RPL19	ENSFCAP00000019763	ENSFCAP00000028930	Uncharacterized protein.	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.999
M3WZH2_FELCA	RPL23	ENSFCAP00000019763	ENSFCAP00000013451	Uncharacterized protein.	Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.	0.998
M3WZH2_FELCA	RPL24	ENSFCAP00000019763	ENSFCAP00000003066	Uncharacterized protein.	60S ribosomal protein L24; Belongs to the eukaryotic ribosomal protein eL24 family.	0.996
M3WZH2_FELCA	RPL26	ENSFCAP00000019763	ENSFCAP00000010458	Uncharacterized protein.	Ribosomal protein L26.	0.996
M3WZH2_FELCA	RPL27	ENSFCAP00000019763	ENSFCAP00000012189	Uncharacterized protein.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.994
M3WZH2_FELCA	RPL3	ENSFCAP00000019763	ENSFCAP00000005405	Uncharacterized protein.	Ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.	0.997
M3WZH2_FELCA	RPL34	ENSFCAP00000019763	ENSFCAP00000014375	Uncharacterized protein.	Ribosomal protein L34.	0.994
M3WZH2_FELCA	RPL6	ENSFCAP00000019763	ENSFCAP00000006368	Uncharacterized protein.	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	0.998
M3WZH2_FELCA	RPL7	ENSFCAP00000019763	ENSFCAP00000039305	Uncharacterized protein.	Uncharacterized protein.	0.996
M3WZH2_FELCA	RPL7A	ENSFCAP00000019763	ENSFCAP00000044690	Uncharacterized protein.	Ribosomal protein L7a.	0.998
M3WZH2_FELCA	RPL9	ENSFCAP00000019763	ENSFCAP00000011397	Uncharacterized protein.	Ribosomal protein L9.	0.996
RPL13	M3WZH2_FELCA	ENSFCAP00000062065	ENSFCAP00000019763	Uncharacterized protein.	Uncharacterized protein.	0.998
RPL13	RPL13A	ENSFCAP00000062065	ENSFCAP00000008520	Uncharacterized protein.	Ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family.	0.999
RPL13	RPL14	ENSFCAP00000062065	ENSFCAP00000014518	Uncharacterized protein.	Ribosomal_L14e domain-containing protein.	0.998
RPL13	RPL15	ENSFCAP00000062065	ENSFCAP00000032721	Uncharacterized protein.	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	0.998