(10 nodes) Mixed, incl. Ribosomal protein S30, and Ribosomal protein S9 network (Felis catus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FAU	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (133 aa)
	RPS16	Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (146 aa)
	RPS7-2	40S ribosomal protein S7; Required for rRNA maturation; Belongs to the eukaryotic ribosomal protein eS7 family. (153 aa)
	M3XD77_FELCA	40S_SA_C domain-containing protein. (253 aa)
	M3XF34_FELCA	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family. (143 aa)
	ENSFCAP00000029201	Uncharacterized protein. (56 aa)
	LOC101086240	Ribosomal_S17_N domain-containing protein. (132 aa)
	ENSFCAP00000030239	Uncharacterized protein. (145 aa)
	ENSFCAP00000036956	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (102 aa)
	RPS21	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (83 aa)

Your Current Organism:

Felis catus

NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSFCAP00000029201	ENSFCAP00000030239	ENSFCAP00000029201	ENSFCAP00000030239	Uncharacterized protein.	Uncharacterized protein.	0.986
ENSFCAP00000029201	ENSFCAP00000036956	ENSFCAP00000029201	ENSFCAP00000036956	Uncharacterized protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.990
ENSFCAP00000029201	FAU	ENSFCAP00000029201	ENSFCAP00000001339	Uncharacterized protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.990
ENSFCAP00000029201	LOC101086240	ENSFCAP00000029201	ENSFCAP00000029897	Uncharacterized protein.	Ribosomal_S17_N domain-containing protein.	0.990
ENSFCAP00000029201	M3XD77_FELCA	ENSFCAP00000029201	ENSFCAP00000024583	Uncharacterized protein.	40S_SA_C domain-containing protein.	0.998
ENSFCAP00000029201	M3XF34_FELCA	ENSFCAP00000029201	ENSFCAP00000025243	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	0.998
ENSFCAP00000029201	RPS16	ENSFCAP00000029201	ENSFCAP00000009979	Uncharacterized protein.	Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.	0.999
ENSFCAP00000029201	RPS21	ENSFCAP00000029201	ENSFCAP00000039090	Uncharacterized protein.	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.	0.987
ENSFCAP00000029201	RPS7-2	ENSFCAP00000029201	ENSFCAP00000023928	Uncharacterized protein.	40S ribosomal protein S7; Required for rRNA maturation; Belongs to the eukaryotic ribosomal protein eS7 family.	0.987
ENSFCAP00000030239	ENSFCAP00000029201	ENSFCAP00000030239	ENSFCAP00000029201	Uncharacterized protein.	Uncharacterized protein.	0.986
ENSFCAP00000030239	ENSFCAP00000036956	ENSFCAP00000030239	ENSFCAP00000036956	Uncharacterized protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.991
ENSFCAP00000030239	FAU	ENSFCAP00000030239	ENSFCAP00000001339	Uncharacterized protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.991
ENSFCAP00000030239	LOC101086240	ENSFCAP00000030239	ENSFCAP00000029897	Uncharacterized protein.	Ribosomal_S17_N domain-containing protein.	0.980
ENSFCAP00000030239	M3XD77_FELCA	ENSFCAP00000030239	ENSFCAP00000024583	Uncharacterized protein.	40S_SA_C domain-containing protein.	0.986
ENSFCAP00000030239	M3XF34_FELCA	ENSFCAP00000030239	ENSFCAP00000025243	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	0.987
ENSFCAP00000030239	RPS16	ENSFCAP00000030239	ENSFCAP00000009979	Uncharacterized protein.	Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.	0.998
ENSFCAP00000030239	RPS21	ENSFCAP00000030239	ENSFCAP00000039090	Uncharacterized protein.	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.	0.963
ENSFCAP00000030239	RPS7-2	ENSFCAP00000030239	ENSFCAP00000023928	Uncharacterized protein.	40S ribosomal protein S7; Required for rRNA maturation; Belongs to the eukaryotic ribosomal protein eS7 family.	0.962
ENSFCAP00000036956	ENSFCAP00000029201	ENSFCAP00000036956	ENSFCAP00000029201	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	Uncharacterized protein.	0.990
ENSFCAP00000036956	ENSFCAP00000030239	ENSFCAP00000036956	ENSFCAP00000030239	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	Uncharacterized protein.	0.991