STRINGSTRING
GDF5 GDF5 CHADL CHADL ADAMTS7 ADAMTS7 BMP4 BMP4 RARG RARG LTBP3 LTBP3 EFEMP1 EFEMP1 RARB RARB GLI3 GLI3 SNAI2 SNAI2 ADAMTS12 ADAMTS12 TGFBR1 TGFBR1 SOX9 SOX9 CCN4 CCN4 RFLNB RFLNB NKX3-2 NKX3-2 RFLNA RFLNA PTPN11 PTPN11
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GDF5Growth differentiation factor 5. (499 aa)
CHADLChondroadherin like. (891 aa)
ADAMTS7ADAM metallopeptidase with thrombospondin type 1 motif 7. (1566 aa)
BMP4Bone morphogenetic protein 4. (409 aa)
RARGRetinoic acid receptor gamma. (459 aa)
LTBP3Latent transforming growth factor beta binding protein 3. (1302 aa)
EFEMP1EGF containing fibulin extracellular matrix protein 1. (504 aa)
RARBRetinoic acid receptor beta. (448 aa)
GLI3GLI family zinc finger 3. (1578 aa)
SNAI2Uncharacterized protein. (268 aa)
ADAMTS12ADAM metallopeptidase with thrombospondin type 1 motif 12. (1600 aa)
TGFBR1Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (507 aa)
SOX9SRY-box transcription factor 9. (511 aa)
CCN4Cellular communication network factor 4. (367 aa)
RFLNBRefilin B. (218 aa)
NKX3-2NK3 homeobox 2. (379 aa)
RFLNARefilin A. (209 aa)
PTPN11Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (597 aa)
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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