STRINGSTRING
ATG12 ATG12 MAP1LC3B MAP1LC3B GABARAPL1 GABARAPL1 MAP1LC3A MAP1LC3A GABARAPL2 GABARAPL2 GABARAP GABARAP
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ATG12Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (140 aa)
MAP1LC3BUncharacterized protein. (309 aa)
GABARAPL1GABA type A receptor associated protein like 1. (151 aa)
MAP1LC3AMicrotubule associated protein 1 light chain 3 alpha. (121 aa)
GABARAPL2GABA type A receptor associated protein like 2. (117 aa)
GABARAPGABA type A receptor-associated protein. (117 aa)
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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