STRINGSTRING
ATG7 ATG7 SNCA SNCA SKP1 SKP1 FBXO2 FBXO2 PSEN1 PSEN1 NCSTN NCSTN ATG5 ATG5 HDAC6 HDAC6 PLD1 PLD1 PSMC1 PSMC1 SOD1 SOD1 NBR1 NBR1 TARDBP TARDBP UCHL1 UCHL1 PINK1 PINK1 APP APP UBR1 UBR1 ATG12 ATG12 CTSD CTSD NEDD4 NEDD4 CTRL CTRL BECN1 BECN1 BRCA1 BRCA1 UBQLN1 UBQLN1 UBE2W UBE2W FUS FUS CUL1 CUL1 UBQLN2 UBQLN2 MDM2 MDM2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ATG7Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 as well as the ATG8 family proteins for their conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Required for autophagic death induced by caspase-8 inhibition. Required for mitophagy which contributes to regulate mitochondrial quantity and quality by eliminating the mitochondria [...] (752 aa)
SNCAAlpha-synuclein; Belongs to the synuclein family. (140 aa)
SKP1Uncharacterized protein; Belongs to the SKP1 family. (168 aa)
FBXO2F-box protein 2. (297 aa)
PSEN1Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (455 aa)
NCSTNNicastrin. (709 aa)
ATG5Autophagy protein 5; Involved in autophagic vesicle formation. (275 aa)
HDAC6Histone deacetylase 6. (1178 aa)
PLD1Phospholipase. (1074 aa)
PSMC1AAA domain-containing protein; Belongs to the AAA ATPase family. (440 aa)
SOD1Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. (155 aa)
NBR1NBR1 autophagy cargo receptor. (968 aa)
TARDBPTAR DNA binding protein. (414 aa)
UCHL1Ubiquitin carboxyl-terminal hydrolase. (347 aa)
PINK1PTEN induced kinase 1. (581 aa)
APPAmyloid-beta A4 protein; Functions as a cell surface receptor and performs physiological functions on the surface of neurons relevant to neurite growth, neuronal adhesion and axonogenesis. Interaction between APP molecules on neighboring cells promotes synaptogenesis. Involved in cell mobility and transcription regulation through protein-protein interactions (By similarity). Can promote transcription activation through binding to APBB1-KAT5 and inhibit Notch signaling through interaction with Numb (By similarity). Couples to apoptosis-inducing pathways such as those mediated by G(O) an [...] (935 aa)
UBR1E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. (1753 aa)
ATG12Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (140 aa)
CTSDPeptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (408 aa)
NEDD4NEDD4 E3 ubiquitin protein ligase. (1323 aa)
CTRLChymotrypsin like; Belongs to the peptidase S1 family. (264 aa)
BECN1Beclin 1. (448 aa)
BRCA1Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] (1872 aa)
UBQLN1Ubiquilin 1. (591 aa)
UBE2WUBIQUITIN_CONJUGAT_2 domain-containing protein. (180 aa)
FUSFUS RNA binding protein. (516 aa)
CUL1Cullin 1; Belongs to the cullin family. (829 aa)
UBQLN2Ubiquilin 2. (815 aa)
MDM2E3 ubiquitin-protein ligase Mdm2; E3 ubiquitin-protein ligase that mediates ubiquitination of p53/TP53, leading to its degradation by the proteasome. Inhibits p53/TP53- and p73/TP73-mediated cell cycle arrest and apoptosis by binding its transcriptional activation domain. Also acts as a ubiquitin ligase E3 toward itself and ARRB1. Permits the nuclear export of p53/TP53. Promotes proteasome-dependent ubiquitin-independent degradation of retinoblastoma RB1 protein. Inhibits DAXX-mediated apoptosis by inducing its ubiquitination and degradation. Component of the TRIM28/KAP1-MDM2-p53/TP53 [...] (712 aa)
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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