(40 nodes) Fatty acid degradation network (Felis catus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GCDH	Glutaryl-CoA dehydrogenase. (438 aa)
	ACADSB	Acyl-CoA dehydrogenase short/branched chain. (432 aa)
	ALDH9A1	Aldehyde dehydrogenase 9 family member A1; Belongs to the aldehyde dehydrogenase family. (518 aa)
	ADH5	S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (374 aa)
	ACSL1	Acyl-CoA synthetase long chain family member 1. (698 aa)
	ACSBG1	Acyl-CoA synthetase bubblegum family member 1. (815 aa)
	CPT1C	Carnitine palmitoyltransferase 1C; Belongs to the carnitine/choline acetyltransferase family. (803 aa)
	EHHADH	Enoyl-CoA hydratase and 3-hydroxyacyl CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. (806 aa)
	ECI1	Enoyl-CoA delta isomerase 1; Belongs to the enoyl-CoA hydratase/isomerase family. (302 aa)
	ALDH16A1	Aldehyde dehydrogenase family 16 member A1. (802 aa)
	ACSL3	Acyl-CoA synthetase long chain family member 3. (720 aa)
	HADHA	Hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha; Belongs to the enoyl-CoA hydratase/isomerase family. (763 aa)
	HADHB	Hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta; Belongs to the thiolase-like superfamily. Thiolase family. (475 aa)
	ECHS1	Enoyl-CoA hydratase, short chain 1; Belongs to the enoyl-CoA hydratase/isomerase family. (324 aa)
	ACOX3	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (700 aa)
	ACOX1	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (661 aa)
	ACADS	Acyl-CoA dehydrogenase short chain. (412 aa)
	ACADL	Acyl-CoA dehydrogenase long chain. (430 aa)
	LOC101100387	PKS_ER domain-containing protein. (375 aa)
	ALDH2	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. (517 aa)
	ACADM	Acyl-CoA dehydrogenase medium chain. (445 aa)
	ENSFCAP00000027010	Uncharacterized protein. (425 aa)
	CPT1B	Carnitine palmitoyltransferase 1B; Belongs to the carnitine/choline acetyltransferase family. (772 aa)
	ACSL4	Acyl-CoA synthetase long chain family member 4. (711 aa)
	LOC101094994	Uncharacterized protein; Belongs to the cytochrome P450 family. (510 aa)
	ALDH1B1	Aldehyde dehydrogenase 1 family member B1; Belongs to the aldehyde dehydrogenase family. (519 aa)
	CPT2	Carnitine palmitoyltransferase 2; Belongs to the carnitine/choline acetyltransferase family. (696 aa)
	ACSL6	AMP-binding domain-containing protein. (722 aa)
	ACADVL	Acyl-CoA dehydrogenase very long chain. (655 aa)
	ACAA2	Acetyl-CoA acyltransferase 2; Belongs to the thiolase-like superfamily. Thiolase family. (402 aa)
	ALDH7A1	Aldehyde dehydrogenase 7 family member A1; Belongs to the aldehyde dehydrogenase family. (638 aa)
	ACSL5	Acyl-CoA synthetase long chain family member 5. (670 aa)
	ACAA1	Acetyl-CoA acyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family. (456 aa)
	CPT1A	Carnitine palmitoyltransferase 1A; Belongs to the carnitine/choline acetyltransferase family. (773 aa)
	ALDH3A2	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (515 aa)
	LOC102900010	AMP-binding domain-containing protein. (758 aa)
	ACAT2	Acetyl-CoA acetyltransferase 2; Belongs to the thiolase-like superfamily. Thiolase family. (403 aa)
	LOC101083281	Uncharacterized protein. (480 aa)
	ACAT1	Acetyl-CoA acetyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family. (517 aa)
	HADH	Hydroxyacyl-CoA dehydrogenase. (338 aa)

Your Current Organism:

Felis catus

NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACAA1	ACAA2	ENSFCAP00000053472	ENSFCAP00000048247	Acetyl-CoA acyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family.	Acetyl-CoA acyltransferase 2; Belongs to the thiolase-like superfamily. Thiolase family.	0.933
ACAA1	ACADL	ENSFCAP00000053472	ENSFCAP00000019498	Acetyl-CoA acyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family.	Acyl-CoA dehydrogenase long chain.	0.973
ACAA1	ACADM	ENSFCAP00000053472	ENSFCAP00000025061	Acetyl-CoA acyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family.	Acyl-CoA dehydrogenase medium chain.	0.968
ACAA1	ACADS	ENSFCAP00000053472	ENSFCAP00000019301	Acetyl-CoA acyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family.	Acyl-CoA dehydrogenase short chain.	0.988
ACAA1	ACADSB	ENSFCAP00000053472	ENSFCAP00000003158	Acetyl-CoA acyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family.	Acyl-CoA dehydrogenase short/branched chain.	0.986
ACAA1	ACADVL	ENSFCAP00000053472	ENSFCAP00000047823	Acetyl-CoA acyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family.	Acyl-CoA dehydrogenase very long chain.	0.968
ACAA1	ACAT1	ENSFCAP00000053472	ENSFCAP00000060380	Acetyl-CoA acyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family.	Acetyl-CoA acetyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family.	0.944
ACAA1	ACAT2	ENSFCAP00000053472	ENSFCAP00000059793	Acetyl-CoA acyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family.	Acetyl-CoA acetyltransferase 2; Belongs to the thiolase-like superfamily. Thiolase family.	0.929
ACAA1	ACOX1	ENSFCAP00000053472	ENSFCAP00000016791	Acetyl-CoA acyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.989
ACAA1	ACOX3	ENSFCAP00000053472	ENSFCAP00000014183	Acetyl-CoA acyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.975
ACAA1	ACSBG1	ENSFCAP00000053472	ENSFCAP00000005498	Acetyl-CoA acyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family.	Acyl-CoA synthetase bubblegum family member 1.	0.691
ACAA1	ACSL1	ENSFCAP00000053472	ENSFCAP00000004713	Acetyl-CoA acyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family.	Acyl-CoA synthetase long chain family member 1.	0.655
ACAA1	ACSL5	ENSFCAP00000053472	ENSFCAP00000052407	Acetyl-CoA acyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family.	Acyl-CoA synthetase long chain family member 5.	0.609
ACAA1	ACSL6	ENSFCAP00000053472	ENSFCAP00000041452	Acetyl-CoA acyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family.	AMP-binding domain-containing protein.	0.603
ACAA1	ALDH16A1	ENSFCAP00000053472	ENSFCAP00000008518	Acetyl-CoA acyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family.	Aldehyde dehydrogenase family 16 member A1.	0.425
ACAA1	ALDH1B1	ENSFCAP00000053472	ENSFCAP00000039511	Acetyl-CoA acyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family.	Aldehyde dehydrogenase 1 family member B1; Belongs to the aldehyde dehydrogenase family.	0.425
ACAA1	ALDH2	ENSFCAP00000053472	ENSFCAP00000022517	Acetyl-CoA acyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family.	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.	0.425
ACAA1	ALDH3A2	ENSFCAP00000053472	ENSFCAP00000054227	Acetyl-CoA acyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family.	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.424
ACAA1	ALDH7A1	ENSFCAP00000053472	ENSFCAP00000052117	Acetyl-CoA acyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family.	Aldehyde dehydrogenase 7 family member A1; Belongs to the aldehyde dehydrogenase family.	0.480
ACAA1	ALDH9A1	ENSFCAP00000053472	ENSFCAP00000003978	Acetyl-CoA acyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family.	Aldehyde dehydrogenase 9 family member A1; Belongs to the aldehyde dehydrogenase family.	0.553